| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_4366 |
|---|
| Symbol | |
|---|
| ID | 4313260 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria AMMD |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008391 |
|---|
| Strand | - |
|---|
| Start bp | 1300568 |
|---|
| End bp | 1301602 |
|---|
| Gene Length | 1035 bp |
|---|
| Protein Length | 344 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 638152206 |
|---|
| Product | rod shape-determining protein MreB |
|---|
| Protein accession | YP_776252 |
|---|
| Protein GI | 115359114 |
|---|
| COG category | [D] Cell cycle control, cell division, chromosome partitioning |
|---|
| COG ID | [COG1077] Actin-like ATPase involved in cell morphogenesis |
|---|
| TIGRFAM ID | [TIGR00904] cell shape determining protein, MreB/Mrl family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 3 |
|---|
| Fosmid unclonability p-value | 0.00313283 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGTCGACAC CGCTGTTCGG AAAGTTGTTT GCGCAACCCG TTGCGATCGA CCCTGGAACG
GCGAGTACGC GGATTTATAC GCATGAGCGT GGCGTGGTGC TGAACCAGCC GTCGGTCGTC
TGCTTCCGCA AGGGCGGGGC GTCCGACGCG CGGCCGACCC TCGAGGCCGT CGGCGAGCTC
GCGAAGGCGC TGCTCGGCCG CGAGCCAGGG CATCTGGAGG CCGTGCGGCC GATGCGGCAC
GGCGTGATCG CCGATGCGCA CGCCGCCGTC CAGATGATCC GCCGCTTCAT CGACATGTCG
CGCACGCGTT CGCGCTTCAG CCGCCGTGTC GAGGTCACGC TGTGCGTGCC GTCGGATGCG
ACGGCGGTCG AGCGCCGCGC GATCCGCGAG GCCGCGTTCG CGGCCGGTGT GTCGGAGGTC
GAACTGATCG AGGAAGCGCT CGCGGCCGGG CTCGGCGCGG GGTTGCCGGT GACCGAGCCG
GTCGGCTCGA TGGTCATCGA CATCGGCGCG GGGACGACCG AAGTCGCGGT GATCGCGCTC
GGCGGCATCG TCTACCGCGA GTCGATCCGC GTCGGCGGCA ACCAGTTCGA CGCGGCGATC
ATCAACTACG TGCGCAACGT GTACGGCGTG CTGCTCGGCG AGCAGACGGC CGAGCGCGTG
AAGAACACGA TCGGCTCGGC CACCCGCGCC GTGCCGCGCG CGTCGACCCG CGCGATCGGG
CGCGGCATCG AGGACGGCCT GCCGCGCTCG ATCGAGCTGT CCAACCACGA CGTGGCGGAC
GCGCTGGCCG CGCCGCTCAA GCAGGTGATC GGCGCGGTGA AGTCGGTGCT GGAAAACGCG
CCGGCCGAAC TCGTGACCGA CATCGCGCAT CGCGGCGTGG TGCTGACGGG CGGCGGCGCG
CTGCTCGCGG ATCTCGAGCG CCTGCTGCGC GACGAGACCG GCCTGGTCGC CCGGATCGCC
GATGATCCTG CCACCTGCGC GGTGCGTGGC GCGGGCGAGG CGATGGGGCG GCTTGCGATG
TGCCCGGTGG ATTGA
|
|---|
| Protein sequence | MSTPLFGKLF AQPVAIDPGT ASTRIYTHER GVVLNQPSVV CFRKGGASDA RPTLEAVGEL
AKALLGREPG HLEAVRPMRH GVIADAHAAV QMIRRFIDMS RTRSRFSRRV EVTLCVPSDA
TAVERRAIRE AAFAAGVSEV ELIEEALAAG LGAGLPVTEP VGSMVIDIGA GTTEVAVIAL
GGIVYRESIR VGGNQFDAAI INYVRNVYGV LLGEQTAERV KNTIGSATRA VPRASTRAIG
RGIEDGLPRS IELSNHDVAD ALAAPLKQVI GAVKSVLENA PAELVTDIAH RGVVLTGGGA
LLADLERLLR DETGLVARIA DDPATCAVRG AGEAMGRLAM CPVD
|
|---|
| |