Gene Bamb_4365 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_4365 
Symbol 
ID4313259 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008391 
Strand- 
Start bp1299703 
End bp1300335 
Gene Length633 bp 
Protein Length210 aa 
Translation table11 
GC content68% 
IMG OID638152205 
Producthypothetical protein 
Protein accessionYP_776251 
Protein GI115359113 
COG category[S] Function unknown 
COG ID[COG2949] Uncharacterized membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.980357 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones2 
Fosmid unclonability p-value0.000669718 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGCCCGGA TCGGCCGTGT GCTGGCAGCG TTCGCGTGCC TGTGGATCGT CGCGGCGGTC 
GTGCTCGTCG GCGCGGGGAT GCGGATGCCG AGCGAGCCGG CCGATGTCGC GGTGATCTTC 
GGCAATGCGC TGGATGACCG CGGCGCGCCG AAACCCGTGC TGGCCGCGCG GCTCGACGTC 
GGCGTGCGCT GCTATCGCGA AGGGCAATGC CCGGCGTTCC TCGTCAGCGG CGCGATCGAC 
GGCCCCGGGC TGAACGAGGC GACCGCGATG CGTGACTATC TGGTCGCGCG CGGCGTGCCG 
GCCGAGCGGA TCGCCGTCGA CGACCAGGGC GACAACACGC TCGCAACCGC GCAGCACACG 
CGGGCGTACC TGCAAGCGCA CCGGCTTTCG CGCGTGCTGA TCATCAGTCA GTACTACCAC 
CTCGCGCGGG CGCGCCTCGC GTTCGAGCGG GTCGGCATCG CCGGCGCGAA CATCTCCGCC 
GCGTATCCGC ATCACTTCCA GTTGCGCGAT ATCTATTCGA GCTGGCGGGA AGTGCCGGCG 
TATGCGATCT ATGTGCTGCG TCTATGGCTC AATCCCGACG CACGCCCCGT GTCGTTCCGG 
CCGATGCTTT ATCTGATGAG CCTGTTTTCG TAA
 
Protein sequence
MARIGRVLAA FACLWIVAAV VLVGAGMRMP SEPADVAVIF GNALDDRGAP KPVLAARLDV 
GVRCYREGQC PAFLVSGAID GPGLNEATAM RDYLVARGVP AERIAVDDQG DNTLATAQHT 
RAYLQAHRLS RVLIISQYYH LARARLAFER VGIAGANISA AYPHHFQLRD IYSSWREVPA 
YAIYVLRLWL NPDARPVSFR PMLYLMSLFS