| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_4361 |
|---|
| Symbol | |
|---|
| ID | 4313255 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria AMMD |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008391 |
|---|
| Strand | + |
|---|
| Start bp | 1287735 |
|---|
| End bp | 1288625 |
|---|
| Gene Length | 891 bp |
|---|
| Protein Length | 296 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 638152201 |
|---|
| Product | LysR family transcriptional regulator |
|---|
| Protein accession | YP_776247 |
|---|
| Protein GI | 115359109 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 0.0000122892 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 1 |
|---|
| Fosmid unclonability p-value | 0.0000705341 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGACTAAGC TCCGCCCTCA CCTCCCACTG AATGCGTTGC GCGCGTTCGA ATCGTCGGCG
CGCCACCTGA ACTTCACGCG CGCCGGCCTC GAGCTGAGCG TGACGCAGGC GGCCGTGAGC
CAGCAGGTGC GCTCGCTGGA GGAGCGGCTC GGCTGCGCGC TATTCACGCG GCTGCCGCGC
GGTCTCGGCC TCACCGACGA AGGGCGCGCG CTGCTGCCGG TGCTCAGCGA CGCCTTCAGC
CGGATCGAAA CCGTGCTCAA GCAGTTCGAC GGCGGGCGCT TCCACGAGGT GCTCACGCTC
GGCGCGGTCG GCACCTTTGC CATAGGCTGG CTAATGCCAC GGTTGAAGCG CTTCGGCGAC
ACGCACCCGT TCGTCGAGCT GCGGCTGCGG ACCAACAACA ACGTCGTCGA CCTCGCGGCC
GAGGGCCTCG ATTTCGCGAT CCGCTTCGGT GAAGGCAACT GGCCGGCGAC GCGCAACGAG
CGGCTGCTCG ACGCGCCGCT CACCGCGCTG TGCGCGCCGG AGATCGCGCG CCGCCTCGCG
GCGCCGGCCG ATCTCGCGAA CGAAACGCTG CTGCGCTCGT ACCGCACCGA CGAATGGCTC
GGCTGGTTCG ACGCCGCGCA GCTCGAACCG TGGTCGGTCA ACGGGCCGGT GTTCGATTCG
TCACGGCTGA TGGTCGAGGC GGCGATGCAA GGCGCGGGCA TCGCGCTCGC GCCGGCCTGC
ATGTTCGCGC GCGAACTGCA GCTGGGCCTG CTCGCGCGGC CGCTCGACAT CGACGTGCGC
GCGGGCGGCT ACTGGCTCAC GTCGCTGAAG TCGAAGCCGC TCACGCCGGC GATGACGCTG
TTTCGGGACT GGATCGTCGC GGAAGCGGCC GGCGCGGCAC CGGTCGAATG A
|
|---|
| Protein sequence | MTKLRPHLPL NALRAFESSA RHLNFTRAGL ELSVTQAAVS QQVRSLEERL GCALFTRLPR
GLGLTDEGRA LLPVLSDAFS RIETVLKQFD GGRFHEVLTL GAVGTFAIGW LMPRLKRFGD
THPFVELRLR TNNNVVDLAA EGLDFAIRFG EGNWPATRNE RLLDAPLTAL CAPEIARRLA
APADLANETL LRSYRTDEWL GWFDAAQLEP WSVNGPVFDS SRLMVEAAMQ GAGIALAPAC
MFARELQLGL LARPLDIDVR AGGYWLTSLK SKPLTPAMTL FRDWIVAEAA GAAPVE
|
|---|
| |