| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_4345 |
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| Symbol | |
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| ID | 4313239 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008391 |
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| Strand | + |
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| Start bp | 1271806 |
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| End bp | 1274145 |
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| Gene Length | 2340 bp |
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| Protein Length | 779 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 638152185 |
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| Product | lysine decarboxylase |
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| Protein accession | YP_776231 |
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| Protein GI | 115359093 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1982] Arginine/lysine/ornithine decarboxylases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.913675 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 2 |
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| Fosmid unclonability p-value | 0.000705117 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGACCGCTA CCTTGACCCA ACCGGCGTTT CGCCGCCTCG GCATGAAGGC GCTGCTCGTG
CAGCACGACA TCGACGAACG CACGGCCACC GGCCGCGCAG CCACCGCCCT CGCCGAAGAA
TTGCGCGCCC GGCTCGTCGA CGTCGTGATC GCGACGTCCG CCGAAGACGC GCGCGCGGTG
GTCGACGCCG ATCCCGCGAT CCAGTGCCTG CTGCTCAACT GGGAGCTCGG CAACGATCCC
GAGCATGCGC CCGCGCGGGC CGTGCTCGAC GCGATGCGCG CACGCAATGC GACGGTGCCG
GTGTTCCTGC TCGCGAGCCG CGCGAGCGCG GCCGCGATTC CCGTCGACGC GATGCGCAAG
GCCGACGACT TCATCTGGAT GCTGGAGGAC ACCACCGCGT TCATCGGCGG GCGGATCGTC
GCCGCGATCG AACGCTATCG CGAGACCGTG CTGCCGCCGA TGTTCCGCGC ACTCGCGCAG
TTCTCGCGCG TGTACGAATA CTCGTGGCAC ACGCCGGGCC ACACAGGCGG CACCGCATTC
CTGAAATCGC CGGTCGGCCG CGCGTACTTC GAATTCTTCG GCGAAGCGCT GTTCCGCTCG
GACCTGTCGA TCTCGGTCGG CGAACTCGGC TCGCTGCTCG ACCACTCGGG CCCCATCGGC
GAAAGCGAAC GCTACGCCGC GCGCGTGTTC GGCGCGCACC GCACGTATCA CGTGACGAAC
GGCTCGTCGA TGTCGAACCG CGTGATCCTG ATGGGGAGCG TCACGCGCAA TCAGGTCGCG
CTGTGCGACC GCAACTGCCA CAAGTCGGCC GAGCATGCGA TGACGATGTC CGGCGCGATT
CCGACCTACC TGATCCCGTC GCGCAACCAT TACGGGATCA TCGGGCCGAT CATGCCGGAA
CGGCTCACGG CCGCCGCCGT GCGGCTCGCG GTCGACGCGA ATCCGCTCGT GCGCGGCCGC
GACGGCATCG ATCCGACGCC CGTGCATGCG CTGATCACGA ACTCGACCTA CGACGGCCTC
TGCTACAACG TCACGCGCGT CGAGGAACTG CTCGGCCAGA GCGTCGACCG GCTGCATTTC
GACGAAGCCT GGTACGGCTA TGCGCGCTTC AACCCGATCT ACCGCGACCG TCACGCGATG
CACGGCGATC CGTCGCAGCA CGACGCGAGC AAGCCGACCG TGTTCGCGAC GCAATCGACG
CACAAGCTGC TCGCCGCGCT GTCGCAGGCA TCGTTCATCC ATGTCCGCAA CGGCCGCAAC
CCGATCGAGC ATGCACGCTT CAACGAGGCG TACATGATGC ACGCGTCGAC GTCGCCGAAC
TACGCGATCA TCGCGTCGAA CGACGTGAGT GCCGCGATGA TGGACGGCCC CGGCGGCGAG
GCGCTGACGA CCGACGCGAT CCGCGAGGCC GTGTCGTTTC GCCGGATGCT CGCGCGACTG
CACGCGGAAT GCGAGGAGAA CGACGACTGG TTCTTCAACG GCTGGCAGCC GGACACCGTG
GTCGACCGCA AGACGGGCCG CCGCGTGCGC TTCCATGAAG CGGACGAAAC GCTGCTCGCC
ACCGATCCGT CGTGCTGGGT GCTGCATCCG GGCGACACGT GGCACGGCTT CGGCGAGATC
GAGGACGACT ACTGCATGCT CGACCCGATC AAGGTATCGA TCGTCACGCC GGGCGTCGCG
CCGCACGGCG GCCTGATGCC GGTCGGCATT CCGGCATCGG TCGTCACCGC GTATCTGGAC
CGGCACGGGA TCGTCGTCGA GAAGACGACC GACTTCACGA TCCTGTTCCT ATTCTCGCTC
GGCGTGACGA AGGGCAAGTG GGGCACGCTC GTCAACACGC TGCTCGACTT CAAGCGCGAC
TACGACGCGA ACGCGCCGCT CGAACAGGCG CTGCCGGACC TCGTGGCGCG TTATCCGGAC
CGCTACGGCA AGCTCGGCCT GCGCGAGCTG TGCGACCTGA TGTTCAGCGC AATGAGCGAC
CTGAAGACGA CCGAGATGAT GTCGCGCGGC TTCTCGACGC TGCCGCAGCC CGACTTCAGC
CCGGCCGAGG CGTTCGAGCA TCTCGTGCAC AACGACATCG AGATGCTGGA GCTGTCGGAG
ATGGCGGGCC GCACCGTCGC GACGGGCGTC GTGCCCTATC CGCCCGGCAT TCCGCTGCTG
ATGCCCGGCG AGAACGCGGG GCCGGCCGAC GGGCCGCTGC TCGGCTACCT GAAGGCGCTC
GAGCAATTCG ACCTGCGCTT CCCCGGCTTC ACGCACGATA CGCACGGCGT CGAAGTCGAG
GACGGCGTGT ACCGGATCGC CTGCATCCGG CAAGTCGATC GCAAGACCAA CACGCGCTGA
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| Protein sequence | MTATLTQPAF RRLGMKALLV QHDIDERTAT GRAATALAEE LRARLVDVVI ATSAEDARAV
VDADPAIQCL LLNWELGNDP EHAPARAVLD AMRARNATVP VFLLASRASA AAIPVDAMRK
ADDFIWMLED TTAFIGGRIV AAIERYRETV LPPMFRALAQ FSRVYEYSWH TPGHTGGTAF
LKSPVGRAYF EFFGEALFRS DLSISVGELG SLLDHSGPIG ESERYAARVF GAHRTYHVTN
GSSMSNRVIL MGSVTRNQVA LCDRNCHKSA EHAMTMSGAI PTYLIPSRNH YGIIGPIMPE
RLTAAAVRLA VDANPLVRGR DGIDPTPVHA LITNSTYDGL CYNVTRVEEL LGQSVDRLHF
DEAWYGYARF NPIYRDRHAM HGDPSQHDAS KPTVFATQST HKLLAALSQA SFIHVRNGRN
PIEHARFNEA YMMHASTSPN YAIIASNDVS AAMMDGPGGE ALTTDAIREA VSFRRMLARL
HAECEENDDW FFNGWQPDTV VDRKTGRRVR FHEADETLLA TDPSCWVLHP GDTWHGFGEI
EDDYCMLDPI KVSIVTPGVA PHGGLMPVGI PASVVTAYLD RHGIVVEKTT DFTILFLFSL
GVTKGKWGTL VNTLLDFKRD YDANAPLEQA LPDLVARYPD RYGKLGLREL CDLMFSAMSD
LKTTEMMSRG FSTLPQPDFS PAEAFEHLVH NDIEMLELSE MAGRTVATGV VPYPPGIPLL
MPGENAGPAD GPLLGYLKAL EQFDLRFPGF THDTHGVEVE DGVYRIACIR QVDRKTNTR
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