| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_4343 |
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| Symbol | |
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| ID | 4313237 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008391 |
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| Strand | - |
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| Start bp | 1268768 |
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| End bp | 1269832 |
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| Gene Length | 1065 bp |
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| Protein Length | 354 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 638152183 |
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| Product | 2-nitropropane dioxygenase, NPD |
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| Protein accession | YP_776229 |
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| Protein GI | 115359091 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2070] Dioxygenases related to 2-nitropropane dioxygenase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.147109 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 2 |
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| Fosmid unclonability p-value | 0.000436527 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCTGCCTT CCCGTTTGCC GCTGATTCAG GCCCCGATGG TCGGTTCGCT GAGCGCGCTT
GCAATCGCAG TCTGCGAAGC GGGCGGGCTC GGCTCGCTCG CATGCGCGGC GCTCGGCCCG
CAGCAACTGC GGGACGAGAT CGCGGCGATC CGCGCACGCA CGCAGGCCCC GTTCAACGTG
AACTTCTTCT GCCATACGCC GCCCGCGCCG GACGCCGAGG TCGACGCGCG CTGGCGCGCG
GCACTGGCCG GCTACTACGC GGAAGCCGGG CTCGATCCGG TCGGCGTGAA GGGCGGCGCC
GGCCGCGCAC CGTTCGACGA CGCGATGTGC GCGGTGGTCG AGGAGATGCG GCCGGCCGTC
GTGAGCTTTC ATTTCGGATT GCCGGACGAT GCGTTGCTGG CGCGCGTGCG TCGTACCGGC
GCGCGGATCG TGTCGTCCGC GACGACCGTC GAGGAGGCGC GCTGGCTCGA TGCGCGCGAC
GTCGATGCGA TCGTCGCGCA GGGCGCGGAG GCCGGCGGCC ATCGCGGGAT GTTCCTGACC
GACGACATTC ACGCGCAGCC GGGGCTGTTC GCGCTGTTGC CGCAGATCGT CGACGCGGTG
CGCGCGCCCG TGATCGCGGC GGGCGCGATC GCCGACGGCC GCGGCATCGC GGCCGCTTTC
GCGCTCGGCG CCCGTGCGGT GCAGATCGGC ACCGGCTACC TGCTCACGCC GCAGGCCGGC
CGCTCCGCGC AGCACCGCGC GGCGGTGCGG GCGGCGCGCG ACGACGGCAC CCGCATGACC
AACCTGTACA CGGGTCGGCC GGCGCGCGGC CTGCTGACGC GCTTCATGCG CGAGCAGGGG
CCGATGAGCG CGCTCGCGCC CGCGTTCCCG CTCGCGACGG CCGCGGTCGA TCCGCTGCGC
GGCGCATTCG AACGGCAGGG CCGCGACGAT TTCTCGCTGC TGTGGTCGGG CGAGGCCGCG
GCGCTCGCGC GCGAAGAGGA CGCCGGGGTG CTGACGCGAC GCCTGTGGGC CGACGCGCTG
GCGTGCGCGG CGGGGCTGCG CGACACGTTC CCGCCGGGCG ACTGA
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| Protein sequence | MLPSRLPLIQ APMVGSLSAL AIAVCEAGGL GSLACAALGP QQLRDEIAAI RARTQAPFNV
NFFCHTPPAP DAEVDARWRA ALAGYYAEAG LDPVGVKGGA GRAPFDDAMC AVVEEMRPAV
VSFHFGLPDD ALLARVRRTG ARIVSSATTV EEARWLDARD VDAIVAQGAE AGGHRGMFLT
DDIHAQPGLF ALLPQIVDAV RAPVIAAGAI ADGRGIAAAF ALGARAVQIG TGYLLTPQAG
RSAQHRAAVR AARDDGTRMT NLYTGRPARG LLTRFMREQG PMSALAPAFP LATAAVDPLR
GAFERQGRDD FSLLWSGEAA ALAREEDAGV LTRRLWADAL ACAAGLRDTF PPGD
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