| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_4342 |
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| Symbol | |
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| ID | 4313236 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008391 |
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| Strand | - |
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| Start bp | 1267163 |
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| End bp | 1268617 |
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| Gene Length | 1455 bp |
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| Protein Length | 484 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 638152182 |
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| Product | peptidase M20 |
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| Protein accession | YP_776228 |
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| Protein GI | 115359090 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0624] Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.0845493 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 2 |
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| Fosmid unclonability p-value | 0.000513432 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGACCTCCG TCGACACTAC CCCCGTCCTC GACCATGACA AGCTCGTTAC CTTCGTCGAG
CGCAAGTGGA ACGATGAAAT CCTCCACGCA CTGACCGACT ACATCGCGAT CCCCGCGAAG
AGCCCCGCAT TCGACCCCGA CTGGGCGCAG CGCGGGTATC TCGAACGCGT CGTCACCGAT
GCCGCGCAGT GGGCCGAACG CCAGCCGGTG AAAGGCCTGA AGCTCGAGAT CGTGCGCCTG
CCCGGCCGCA CGCCGGTGAT CTTCTTCGAA ACCCCCGCGA CGCGCGCGGG CAGCACCGAC
ACGATCCTGC TGTACGGCCA CCTCGACAAG CAGCCCGAAT TCGACGGCTG GCGCGCGGAC
CTCGGCCCGT GGACGCCGAA GTTCGAGAAC GGCAAGCTGT ACGGCCGCGG CGGCGCGGAC
GACGGCTACG CGATCTACGC GAGCCTCGCG GCGCTCGGCG CGCTTGACGA GCAGGGCGTC
GAACGGCCGC GCTGCGTCGG CCTGATCGAA ACCTGCGAGG AGTCGGGCAG CTACGACCTG
CTGCCGTACG TCGACGCGCT GCGCGACCGG CTCGGCCAGG TGTCGCTCGT CGTGTGCCTG
GATTCGGGCG CCGGCAACTA CGACCAGATG TGGCTCACGA CGTCGCTGCG CGGGCTGGTG
TCCGGCGACC TGCAGGTCGA GGTGCTCGAG GAAGGCGTTC ACTCGGGCGT CTTCGGCGGC
ATCGCGCCGT CGAGCTTCCG CGTGATGCGT CAGCTGTTCG AGCGCCTCGA AGATGCGAAG
AACGGCAACC TGCTGCCGGG CGTGTTCCAT TGCGAGATTC CCGACAGCCG CGTGCGCGAA
GCCGACGCGG CCGCCGCGAT TCTCGGCGAC ACCGTGTGGA AGGGGCTGCC GTGGGCGTGC
GGGATGGACG GCAAACCGGT GCTGCCGACC ACGACCGATC CGCGCGAGGC GCTGCTGAAT
TCGACGTGGC GTCCGTCGCT GTCGGTGACT GGCGCGGCCG GGCTGCCGGC GCTTTCCGAC
GCGGGCAACG TGCTGCGTCC GCGCACCGCG TTCAAGCTGT CGCTGCGCCT GCCGCCGCTC
GTCGACGCCG CGCAGGCCGT GCAGCAGCTG AAGGAACTGC TCGAACTCGA TCCGCCGTAC
AACGCGAAGG TCACGTTCAA GCCCGACGCG GGCGCCGCGA CCGGCTGGAG CGCGCCGGAT
CTCGCACCGT GGCTCGCGTC GTCGCTCGAC GCCGCGTCGC GCCGCCACTT CGGCGCGGAC
TGCGCGTACA TGGGCCTCGG CGGCACGATC CCGCTGATGA ACGTGCTGCA GGAAGGGTTC
CCGTCCGCGC AGTTCATGGT GTGCGGCGTG CTCGGCCCGA AGTCGAACGC GCACGGGCCG
AACGAATTCC TGCACGTGCC GTACGCGAAG AAGCTGACCG CGGCGGTCGC GGACGTGATC
GCGACCGCGC GCTGA
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| Protein sequence | MTSVDTTPVL DHDKLVTFVE RKWNDEILHA LTDYIAIPAK SPAFDPDWAQ RGYLERVVTD
AAQWAERQPV KGLKLEIVRL PGRTPVIFFE TPATRAGSTD TILLYGHLDK QPEFDGWRAD
LGPWTPKFEN GKLYGRGGAD DGYAIYASLA ALGALDEQGV ERPRCVGLIE TCEESGSYDL
LPYVDALRDR LGQVSLVVCL DSGAGNYDQM WLTTSLRGLV SGDLQVEVLE EGVHSGVFGG
IAPSSFRVMR QLFERLEDAK NGNLLPGVFH CEIPDSRVRE ADAAAAILGD TVWKGLPWAC
GMDGKPVLPT TTDPREALLN STWRPSLSVT GAAGLPALSD AGNVLRPRTA FKLSLRLPPL
VDAAQAVQQL KELLELDPPY NAKVTFKPDA GAATGWSAPD LAPWLASSLD AASRRHFGAD
CAYMGLGGTI PLMNVLQEGF PSAQFMVCGV LGPKSNAHGP NEFLHVPYAK KLTAAVADVI
ATAR
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