Gene Bamb_4339 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_4339 
Symbol 
ID4313233 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008391 
Strand- 
Start bp1264734 
End bp1265312 
Gene Length579 bp 
Protein Length192 aa 
Translation table11 
GC content67% 
IMG OID638152179 
ProductNnrU family protein 
Protein accessionYP_776225 
Protein GI115359087 
COG category[S] Function unknown 
COG ID[COG4094] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.299615 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones2 
Fosmid unclonability p-value0.000380877 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCTCGTCC TGATTCTCGG TTTAGCGATC TTCCTCGGTG TGCATTCGAT CCGGATCGTC 
GCGGATGGCT GGCGCTCCGT CACCATCGAG CGGATCGGCG AGAAACGTTG GAAGGGCCCC 
TATGCGATCG CGTCGATCGT CGGCTTCGTG CTGATCGTCT GGGGTTACGG GATCGCCCGC 
CAGAACGGGA CGCTGCTGTG GGTGTCACCC GTCGGCGTGC GCCACCTCAC CGGCATGCTG 
ACCGCGATCG CATTCGTGCT GATCGCGGCG GCCTACGTGC CGCGCAACCG CATCAAGACG 
CTCGTCGGCC ATCCGATGGT GGCCGGCGTG ATGGTGTGGG CGGTCGCGCA CCTGCTCGCG 
AACGGCACGC TGCATGCGGT CGTGCTGTTC GGCGCATTTT TCGTGTGGTC GCTGGTCGAT 
TTCGTCGTGT GGCGCGCGCG CGACCGCCGC GACGGCGTCC GCTATCCGGC CGGCAGGCTG 
TCGGGCGATG GCGTGACGAT TGCGGCCGGG CTCGTCGTAT GGGCCGTGTT CGCGCTGCTC 
CTGCACGGGC CGCTGATCGG CGTGCGGCCG TTCGGTTGA
 
Protein sequence
MLVLILGLAI FLGVHSIRIV ADGWRSVTIE RIGEKRWKGP YAIASIVGFV LIVWGYGIAR 
QNGTLLWVSP VGVRHLTGML TAIAFVLIAA AYVPRNRIKT LVGHPMVAGV MVWAVAHLLA 
NGTLHAVVLF GAFFVWSLVD FVVWRARDRR DGVRYPAGRL SGDGVTIAAG LVVWAVFALL 
LHGPLIGVRP FG