Gene Bamb_4338 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_4338 
Symbol 
ID4313232 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008391 
Strand
Start bp1263870 
End bp1264607 
Gene Length738 bp 
Protein Length245 aa 
Translation table11 
GC content69% 
IMG OID638152178 
Producthypothetical protein 
Protein accessionYP_776224 
Protein GI115359086 
COG category[R] General function prediction only 
COG ID[COG0730] Predicted permeases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.183177 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00201476 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCTCGCTC TCATCATCAT CGCCGGCCTG TGGGCCGGCC TGCAGAATGC CCTCGCGGGC 
GGCGGCTCGT TCGTCACGCT GCCCGCGCTG ATCCTATCGG GCATGTCGCC GCTCGCGGCG
AACATCACGT CGACGGTCGC GCTGTTCCCC GGTCAGGTCA CGACGGGCTG GGCGAGCCGA
AACATGGTGC GCGGCGCGGG CAAGCTGCCG TTTCGCGCGC TGTTCGCGAT CAGCGTGGTC
GGCGGTGCAC TCGGCGGGCT GCTGCTCCTG AAAACTCCGT CATCGATCTT CTCGCACCTC
GTGCCGTGGC TCGTGCTGTT CGCGACGGTC GTGTTCGCGT GGGGCAGCTT CTTCCGCAAG
CCGGGCGTGG ACACGCAGCA TCTCGGCCCC GTCACGGCCG CGATCGCGCA GTTCCTGATC
GCGATCTACG GCGGCTACTT CGGCGGCGGC ATCGGCTTCC TGATGATGGC CGCACTGACG
ATGGCCGGCC TGTCGCCGCG TCACGCGATG TCGACCAAGA ACGCGCTCGC GGGCGTGATG
AACGCGTCGG CGGTCGTGCT GTTCCTGACG TCACCGCACC TGCACTGGCA GGCGGCGATC
GCGCTCGGCG GCGGCGCGAT CGTCGGCGGC CTGCTCGGCG CGTGGGCGCT GCACCGCGTG
AACGAGCGCG TGCTGCGGAT TGCGATCGTG TGCATCGGCA TCGCGCTGAC CATCGGGCTG
TTCGTCAAGC CGATCTGA
 
Protein sequence
MLALIIIAGL WAGLQNALAG GGSFVTLPAL ILSGMSPLAA NITSTVALFP GQVTTGWASR 
NMVRGAGKLP FRALFAISVV GGALGGLLLL KTPSSIFSHL VPWLVLFATV VFAWGSFFRK
PGVDTQHLGP VTAAIAQFLI AIYGGYFGGG IGFLMMAALT MAGLSPRHAM STKNALAGVM
NASAVVLFLT SPHLHWQAAI ALGGGAIVGG LLGAWALHRV NERVLRIAIV CIGIALTIGL
FVKPI