Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bamb_4338 |
Symbol | |
ID | 4313232 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria AMMD |
Kingdom | Bacteria |
Replicon accession | NC_008391 |
Strand | + |
Start bp | 1263870 |
End bp | 1264607 |
Gene Length | 738 bp |
Protein Length | 245 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 638152178 |
Product | hypothetical protein |
Protein accession | YP_776224 |
Protein GI | 115359086 |
COG category | [R] General function prediction only |
COG ID | [COG0730] Predicted permeases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.183177 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 3 |
Fosmid unclonability p-value | 0.00201476 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCTCGCTC TCATCATCAT CGCCGGCCTG TGGGCCGGCC TGCAGAATGC CCTCGCGGGC GGCGGCTCGT TCGTCACGCT GCCCGCGCTG ATCCTATCGG GCATGTCGCC GCTCGCGGCG AACATCACGT CGACGGTCGC GCTGTTCCCC GGTCAGGTCA CGACGGGCTG GGCGAGCCGA AACATGGTGC GCGGCGCGGG CAAGCTGCCG TTTCGCGCGC TGTTCGCGAT CAGCGTGGTC GGCGGTGCAC TCGGCGGGCT GCTGCTCCTG AAAACTCCGT CATCGATCTT CTCGCACCTC GTGCCGTGGC TCGTGCTGTT CGCGACGGTC GTGTTCGCGT GGGGCAGCTT CTTCCGCAAG CCGGGCGTGG ACACGCAGCA TCTCGGCCCC GTCACGGCCG CGATCGCGCA GTTCCTGATC GCGATCTACG GCGGCTACTT CGGCGGCGGC ATCGGCTTCC TGATGATGGC CGCACTGACG ATGGCCGGCC TGTCGCCGCG TCACGCGATG TCGACCAAGA ACGCGCTCGC GGGCGTGATG AACGCGTCGG CGGTCGTGCT GTTCCTGACG TCACCGCACC TGCACTGGCA GGCGGCGATC GCGCTCGGCG GCGGCGCGAT CGTCGGCGGC CTGCTCGGCG CGTGGGCGCT GCACCGCGTG AACGAGCGCG TGCTGCGGAT TGCGATCGTG TGCATCGGCA TCGCGCTGAC CATCGGGCTG TTCGTCAAGC CGATCTGA
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Protein sequence | MLALIIIAGL WAGLQNALAG GGSFVTLPAL ILSGMSPLAA NITSTVALFP GQVTTGWASR NMVRGAGKLP FRALFAISVV GGALGGLLLL KTPSSIFSHL VPWLVLFATV VFAWGSFFRK PGVDTQHLGP VTAAIAQFLI AIYGGYFGGG IGFLMMAALT MAGLSPRHAM STKNALAGVM NASAVVLFLT SPHLHWQAAI ALGGGAIVGG LLGAWALHRV NERVLRIAIV CIGIALTIGL FVKPI
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