| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_4327 |
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| Symbol | |
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| ID | 4313221 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008391 |
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| Strand | + |
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| Start bp | 1253400 |
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| End bp | 1254344 |
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| Gene Length | 945 bp |
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| Protein Length | 314 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 638152167 |
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| Product | D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding |
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| Protein accession | YP_776213 |
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| Protein GI | 115359075 |
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| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0111] Phosphoglycerate dehydrogenase and related dehydrogenases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.255918 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.0777232 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACGACA TCATCATGCT GGCCACCCGG CTGCCCGCCG GGCAGGAGGC CGAGTATCGC
GCCGCGCTCG CCGCGGCGAT GCCGGCCGAA ACCATCGTGC CCCTGCGCGA GGCCGATGGC
GACGCGCGCG CCGTCGCGAG GGTCGCGGTC GTGGCGCGTC CCGATCCCGC CGAACTCGCC
GCCCTGCCCC GGCTCGCCTG GATCCAGAGT CTGTGGGCCG GCGTCGAGCA GTTGGTCGAG
AGCCTGCCGG CTACCGCGCC GCCCGTGGTC CGGCTGGTGG ACCCGGAAAT GTCGCGCACC
ATGGCCGAGG CGGTGCTGGC CTGGACCTAC TACCTGCAGC GCGAGATGCC CGCCTACCGC
CTTCAGCAGC AGGCGCGCGA ATGGCGGCAG CGGCCCTATC GCAAACCGCA GGACATACAG
GTGGGTATCG TCGGCCTCGG CACGCTCGGG GCGGCCGCCG CCGCGCGCCT GCTCGAGGCG
GGCTTCCGCG TCGCCGGCTG GAGCCGCTCG CCGAAGACCA TGGCCAGCGT GGACACCCAT
CACGGCGCCG AGGGCCTGGC TCGCCTGCTC GGCGCGAGCG AGATCGTGGT TTGCCTGGTG
CCGCTGACCG ACGAGACACG CGGCTTGTTC GACCGGCACA CGCTGTCGGC CATGCGGCCC
GGCGCGGCGC TGATCAATTT CTCGCGCGGC CCGGTGGTGG TCACCCAGGA CCTGCTGCAG
GCCCTCGATG CCGGCCGGCT GTCACATGCG GTGCTCGACG TGTTCGAAGT CGAGCCGCTG
CCCGAGGTTT CGCCGCTCTG GGCCCATCCA GCCGTGACGG TGCTGCCGCA CATCTCGGCG
CCGACCGACC TGCACACGGC GGCGGCCGTG GTCGCGGCCA ATGTCGCCGC CTATCGCGCC
AGCGGCCGCA TCCCGGCCGG CGTCGATCTC TCGCGTGGTT ACTGA
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| Protein sequence | MNDIIMLATR LPAGQEAEYR AALAAAMPAE TIVPLREADG DARAVARVAV VARPDPAELA
ALPRLAWIQS LWAGVEQLVE SLPATAPPVV RLVDPEMSRT MAEAVLAWTY YLQREMPAYR
LQQQAREWRQ RPYRKPQDIQ VGIVGLGTLG AAAAARLLEA GFRVAGWSRS PKTMASVDTH
HGAEGLARLL GASEIVVCLV PLTDETRGLF DRHTLSAMRP GAALINFSRG PVVVTQDLLQ
ALDAGRLSHA VLDVFEVEPL PEVSPLWAHP AVTVLPHISA PTDLHTAAAV VAANVAAYRA
SGRIPAGVDL SRGY
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