| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_4322 |
|---|
| Symbol | |
|---|
| ID | 4313216 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria AMMD |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008391 |
|---|
| Strand | - |
|---|
| Start bp | 1246644 |
|---|
| End bp | 1247720 |
|---|
| Gene Length | 1077 bp |
|---|
| Protein Length | 358 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 638152162 |
|---|
| Product | luciferase family protein |
|---|
| Protein accession | YP_776208 |
|---|
| Protein GI | 115359070 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG2141] Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.161777 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAATTCG CCGTATCACT GAGCATGGAG CGGTTCTCCC CCGAGGCGTC GATGACCGAG
GCGCGCGACC GGCTGCTGGC GCTGGCGCGC GTGGCCGACG AAGGCGGCTT CGAGACGCTC
TGGACTGCAG AGCACCACAC CATCGAATGC ACCATCTCGC CGAACCCGTT CACGGTGCTG
ACCTGGCTGG CCCAGCACAC CGAGCGCATC CGGCTGGGCA CCGCCACCCT GGTGGCGCCT
TACTGGTCGC CGATCCGGCT GGCCGGCGAG GCCGCCATGT GCGATCACCT GAGCAATGGC
CGGCTCGAGT TCGGCATCGC GCGCGGCGCC TACCAGTACG AGTTCGACCG GATGGCCGGC
GGCATTCCCC AGCAGGAAGG CGTGGCCTAC ATGAAGGAGC TGGTGCCGGC CGTCAAGCGG
CTGTGGGAGG GCGACTACGA GCATGAGGGC CATTACTGGC GCTTCCCGCT CGCCACCTCG
GTGCCCAAGC CGCTGCAGCA GCCGCATCCG CCGATCTGGG TGGCCACGCG TGACCCCGGC
AGCTTCGACT GGGCGGTCGG CATCGGCGCC AACATCCTGT CCACGCCGCT GTCGGCGCCG
CCGTCCGAGG TGGCCGTGCT CGGCGCGAAA TTCCGCAAGG CGGTGGCCGA CCATCCCGAG
CATCCGCGCC CGCGCTTCAT GATGCAGCGG CGCACTTGCG TCTACGACCG CGAGGAGGAC
TGGCGGACCG CCGTGCGCCA CAGCGTCGAC TACGGCCGCT ACTTCGAGAA CCTGATGCAG
AACATTGGCA CCGTGCGCAA CGGCTTCCCG GAGGCGGTGC CTTTCGAGAC CGTGGCCAAT
CGCGCCAACT ACGATCCCGC GGCGGTGCGC GACAACCTGA TGTTCGGCAC GCCCGACGAG
GTGATCCGCA AGTTGCAGAT CTACGAGGAC GAGGGCGTCG ACCAGTATTG CCTGGGCCTG
TCCTTCAACC TGCCCTTCGA GCTGCAGATG AAGACGCTGC GCCTGTTCGT CAACGAGATC
ATGCCGCACT TCGCCGCACG CGAGCGCGAG CGCCAGGCCG CGGCGGCGGG GGCCTGA
|
|---|
| Protein sequence | MKFAVSLSME RFSPEASMTE ARDRLLALAR VADEGGFETL WTAEHHTIEC TISPNPFTVL
TWLAQHTERI RLGTATLVAP YWSPIRLAGE AAMCDHLSNG RLEFGIARGA YQYEFDRMAG
GIPQQEGVAY MKELVPAVKR LWEGDYEHEG HYWRFPLATS VPKPLQQPHP PIWVATRDPG
SFDWAVGIGA NILSTPLSAP PSEVAVLGAK FRKAVADHPE HPRPRFMMQR RTCVYDREED
WRTAVRHSVD YGRYFENLMQ NIGTVRNGFP EAVPFETVAN RANYDPAAVR DNLMFGTPDE
VIRKLQIYED EGVDQYCLGL SFNLPFELQM KTLRLFVNEI MPHFAARERE RQAAAAGA
|
|---|
| |