| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_4319 |
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| Symbol | |
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| ID | 4313213 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008391 |
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| Strand | - |
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| Start bp | 1244240 |
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| End bp | 1245427 |
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| Gene Length | 1188 bp |
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| Protein Length | 395 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 638152159 |
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| Product | glycine betaine/L-proline ABC transporter, ATPase subunit |
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| Protein accession | YP_776205 |
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| Protein GI | 115359067 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG4175] ABC-type proline/glycine betaine transport system, ATPase component |
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| TIGRFAM ID | [TIGR01186] glycine betaine/L-proline transport ATP binding subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.751265 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.0948088 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTGAAC GCCTGAAAAT CGAGCATCTG TACAAGGTGT TCTCCGATCG CCCCGAGCGC
GCGCTCGGCA TGCTTCGCCA CGGCGCCAGC AAGGCCGATG TGCTGCGCGA CACCGGCCAG
GTGGTGGGCC TCGACGACGT GTCGCTGAGC GTGCCGGCCG GCGCGATGTA CATGATCATG
GGCCTGTCCG GCTCGGGCAA GTCGACCCTG GCGCGCTGCG TGAACCGGCT CAACGAGCCC
AGCGCCGGGC GCATTCTGCT CGACGACGTG GATCTCTGCG CGCTGGGAGA GCGCGAGCTG
CGCGAGGTAC GCCGCAACCG CATCTCGATG GTGTTCCAGC ATTTCGCGCT GCTGCCGAAC
CGGCGGGTGA TCGAGAACGT CGAGTTCGGC CTGAAGCTGC GCGGCGTGGA CGGCGCGACG
CGCCGCAAGC GCGCCGAGCA GGTGCTCGAG GTGGTGGGCC TGGCGCGCTG GGCCGGCAAG
ATGCCGCACG AGCTGAGCGG CGGGATGCGC CAGCGGGTGG GCCTGGCGCG CGCGCTGGCC
ACCGACGCCG ACATCCTGAT CATGGACGAG GCCTTCAGCG CGCTCGACCC GCTGATCCGC
ACCGAGATGC AGGACGAGCT GCTGCGCCTG CAGCGCAGCC TCAACAAGAC CATCCTGTTC
ATCACACACG ACTTCCAGGA AGCGCTGAAG CTGGGCACGC GCATCGCCAT CATGTCGGAA
GGCAAGCTGG TGCGCGAGGG CACGCCGCAG TCGATCGTGA CCGCGCCCGG CAGCGACTAC
GTGGCCGCCT TCACGCGCGA GGTCGATCGA TCGCGCCTGT TCAACGCCGA GGCCTCGATG
ACGCCGCTGG CGCCGCTGGT GCGCCGCGAG GGCTGGACCG TGCTCGGCTG CGCGGGGTCG
GGGCCGGCCT TCGTGGTGGA CGGTGAGGCG CGCGTGCTGG GCATGCTCGG TGTGGTGGGC
GACACGCAGT TGCAGGCCTT GCGCGATGGC GCCGCGCTGC CGCCGCTGGA TGGCGCGTTC
GCCTGCGTGC CGGGCCATGC GCGCCTGATC GACGTGGCCG GCCATTTCGG CACGGCGCGC
GCGCTCGGCG TACTCGACGA ATCGGGTCGG CTGGTCGGCC GGCTGGAAGC GGGGCAGATC
CTCGCACGCA TCGGCGCGGG CAGCGTCAAC GGAGCTCATC ATGTTTAA
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| Protein sequence | MTERLKIEHL YKVFSDRPER ALGMLRHGAS KADVLRDTGQ VVGLDDVSLS VPAGAMYMIM
GLSGSGKSTL ARCVNRLNEP SAGRILLDDV DLCALGEREL REVRRNRISM VFQHFALLPN
RRVIENVEFG LKLRGVDGAT RRKRAEQVLE VVGLARWAGK MPHELSGGMR QRVGLARALA
TDADILIMDE AFSALDPLIR TEMQDELLRL QRSLNKTILF ITHDFQEALK LGTRIAIMSE
GKLVREGTPQ SIVTAPGSDY VAAFTREVDR SRLFNAEASM TPLAPLVRRE GWTVLGCAGS
GPAFVVDGEA RVLGMLGVVG DTQLQALRDG AALPPLDGAF ACVPGHARLI DVAGHFGTAR
ALGVLDESGR LVGRLEAGQI LARIGAGSVN GAHHV
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