| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_4318 |
|---|
| Symbol | |
|---|
| ID | 4313212 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria AMMD |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008391 |
|---|
| Strand | - |
|---|
| Start bp | 1243297 |
|---|
| End bp | 1244247 |
|---|
| Gene Length | 951 bp |
|---|
| Protein Length | 316 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 638152158 |
|---|
| Product | binding-protein-dependent transport systems inner membrane component |
|---|
| Protein accession | YP_776204 |
|---|
| Protein GI | 115359066 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG4176] ABC-type proline/glycine betaine transport system, permease component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.0670806 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 7 |
|---|
| Fosmid unclonability p-value | 0.08515 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTTAAAG CCGACGATCT GGCGGTATTC CCGATCGCCC AGTGGATCCA GGCCGCCGTG
CAGTGGATCG CGCTGCACCT GCGCCCGCTG TTCCTGGTCA TCAAGTGGCC GATCCAGAAG
CTGCTCGAGG CCAATATCGA CGCCCTGCAC GCGGTGCCGT TCCCGCTGTT CTGCCTGGTT
TGCGCGCTGC TGGCCTGGCG CTTCGCGGGC CGCGCGATCG GCGCCTTCAC CTTGCTCGGG
CTGCTGGCCA TCGCGGTGCT CGGCGTCTGG TCGGACGCGA TGACCACGCT CGCGCTGATC
GTTACCGCGA TCGCCTTCTG CGCCGTGATC GGGATCCCGA TCGGCATCGC CTGCGCGCGC
AGCGAGCGGG TCTGGCGCGT GGTGCAGCCG ATCCTCGACA TCATGCAGAC CACGCCCACC
TTCGTGTACC TGGTGCCGGT GGTGATGCTG TTCGGCGTGG GCACCGTGTC GGGCGAGGTG
GCGGTGGTGA CGGCCGCGAT GCCGCCGCTT ATTCGCTTCA CCAATCTCGG CATCCGCATG
GTCGACCACG AACTAGTCGA GGCCGGACTC GCGTTCGGCG CGGACCGTCG CCAGCTGCTC
TGGGAAGTGC AACTGCCGCT GGCCGTGTCG ACCATCCTCG GCGGCTTGAA CCAGACCGTG
CTGACCGCGA TGGTGATGTC GGTGGTGATC TCGATGATCG GCGCCGAGGG GCTCGGCCTG
GTGGTGCTGC AGGGCCTGGG CCGGCTCGAC GTGGGGCAGG CCGCGATCGG CGGCGTGGCG
ATCGTGATGC TGGCGATGAT GCTCGACCGC GTGACCCAGA AGCTCGCGCG TTCGCAGCCC
GGCGCGGGCG GCTCGCTGCG TTCGGTGGTG GTGCGGCTGG TGCGCGGCGG CCGCGGCGGG
CCTGCGGCGC CGGCCTTGCC CGAGCACAGC GATCCCAAGC AGGCGCTCTG A
|
|---|
| Protein sequence | MFKADDLAVF PIAQWIQAAV QWIALHLRPL FLVIKWPIQK LLEANIDALH AVPFPLFCLV
CALLAWRFAG RAIGAFTLLG LLAIAVLGVW SDAMTTLALI VTAIAFCAVI GIPIGIACAR
SERVWRVVQP ILDIMQTTPT FVYLVPVVML FGVGTVSGEV AVVTAAMPPL IRFTNLGIRM
VDHELVEAGL AFGADRRQLL WEVQLPLAVS TILGGLNQTV LTAMVMSVVI SMIGAEGLGL
VVLQGLGRLD VGQAAIGGVA IVMLAMMLDR VTQKLARSQP GAGGSLRSVV VRLVRGGRGG
PAAPALPEHS DPKQAL
|
|---|
| |