Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bamb_4309 |
Symbol | |
ID | 4313204 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria AMMD |
Kingdom | Bacteria |
Replicon accession | NC_008391 |
Strand | + |
Start bp | 1236992 |
End bp | 1237723 |
Gene Length | 732 bp |
Protein Length | 243 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 638152150 |
Product | GntR family transcriptional regulator |
Protein accession | YP_776196 |
Protein GI | 115359058 |
COG category | [K] Transcription |
COG ID | [COG1802] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.405303 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGTCCCGAC CGAGCGAGCA GCCGTTTCCC GTCACCGTCC CCGCGGCCAA CGGCATGGCT TCCAATATCA CCCTGGCGAC CAGTCTCTAC GATCGGCTGC GCACGGACTT GCTGGCCGGC AAGCTGGAAC CCGGCCGTAA ATTGCAAATC GAATTTCTCT GCGAGCAGTA CCAGGCGGGC CAGACGCCGG TTCGCGAGGC GCTCAACCGG CTCACCTCCG ACGGCCTGGT GGAAAGGCGC GACCAGCGCG GCTTCGCGGT GACGGACATC AGCGCCGACG ACCTGCGCGA GATCACCCGA ACGCGAATCC TTCTCGAAGA AGTCGCGCTG CGTGAAGCAT TTGCCGCCAA CCAGCCCGAG TGGGAAGAAG AACTGGTGCT CGCCTATCAC CGGCTGTCCA AAGTGCCGCG CTCGCTCAAC GAGACCGAGT ATCTGGAGAA CCCAGAGTGG GAGCGGCTCC ACCGCGCGTT CCACCGGGCG CTCATCAGCG GCTGCCGGTC GCGCTGGCTC ATGGGCTTTT GCGAGCAACT CGCCGACCAG CTCTACCGCT ACCGGCAACT GTCGGTGCGG CGCATCTATC CGAACCGACA CGAAAAGGAA GAGCACAAGG CCATGCTGGA CGCGGTCGTC GCCCGAGATT CCCTGCGGGC AATCGAGTTG CTCAAGACGC ACTACCAGCA AACGGCCGAA ATCATTTTGA CCGATACCAC GCTGTTCCCA CGGAACGAAT GA
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Protein sequence | MSRPSEQPFP VTVPAANGMA SNITLATSLY DRLRTDLLAG KLEPGRKLQI EFLCEQYQAG QTPVREALNR LTSDGLVERR DQRGFAVTDI SADDLREITR TRILLEEVAL REAFAANQPE WEEELVLAYH RLSKVPRSLN ETEYLENPEW ERLHRAFHRA LISGCRSRWL MGFCEQLADQ LYRYRQLSVR RIYPNRHEKE EHKAMLDAVV ARDSLRAIEL LKTHYQQTAE IILTDTTLFP RNE
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