Gene Bamb_4309 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_4309 
Symbol 
ID4313204 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008391 
Strand
Start bp1236992 
End bp1237723 
Gene Length732 bp 
Protein Length243 aa 
Translation table11 
GC content63% 
IMG OID638152150 
ProductGntR family transcriptional regulator 
Protein accessionYP_776196 
Protein GI115359058 
COG category[K] Transcription 
COG ID[COG1802] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.405303 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTCCCGAC CGAGCGAGCA GCCGTTTCCC GTCACCGTCC CCGCGGCCAA CGGCATGGCT 
TCCAATATCA CCCTGGCGAC CAGTCTCTAC GATCGGCTGC GCACGGACTT GCTGGCCGGC
AAGCTGGAAC CCGGCCGTAA ATTGCAAATC GAATTTCTCT GCGAGCAGTA CCAGGCGGGC
CAGACGCCGG TTCGCGAGGC GCTCAACCGG CTCACCTCCG ACGGCCTGGT GGAAAGGCGC
GACCAGCGCG GCTTCGCGGT GACGGACATC AGCGCCGACG ACCTGCGCGA GATCACCCGA
ACGCGAATCC TTCTCGAAGA AGTCGCGCTG CGTGAAGCAT TTGCCGCCAA CCAGCCCGAG
TGGGAAGAAG AACTGGTGCT CGCCTATCAC CGGCTGTCCA AAGTGCCGCG CTCGCTCAAC
GAGACCGAGT ATCTGGAGAA CCCAGAGTGG GAGCGGCTCC ACCGCGCGTT CCACCGGGCG
CTCATCAGCG GCTGCCGGTC GCGCTGGCTC ATGGGCTTTT GCGAGCAACT CGCCGACCAG
CTCTACCGCT ACCGGCAACT GTCGGTGCGG CGCATCTATC CGAACCGACA CGAAAAGGAA
GAGCACAAGG CCATGCTGGA CGCGGTCGTC GCCCGAGATT CCCTGCGGGC AATCGAGTTG
CTCAAGACGC ACTACCAGCA AACGGCCGAA ATCATTTTGA CCGATACCAC GCTGTTCCCA
CGGAACGAAT GA
 
Protein sequence
MSRPSEQPFP VTVPAANGMA SNITLATSLY DRLRTDLLAG KLEPGRKLQI EFLCEQYQAG 
QTPVREALNR LTSDGLVERR DQRGFAVTDI SADDLREITR TRILLEEVAL REAFAANQPE
WEEELVLAYH RLSKVPRSLN ETEYLENPEW ERLHRAFHRA LISGCRSRWL MGFCEQLADQ
LYRYRQLSVR RIYPNRHEKE EHKAMLDAVV ARDSLRAIEL LKTHYQQTAE IILTDTTLFP
RNE