Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bamb_4299 |
Symbol | |
ID | 4313194 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria AMMD |
Kingdom | Bacteria |
Replicon accession | NC_008391 |
Strand | - |
Start bp | 1225163 |
End bp | 1226068 |
Gene Length | 906 bp |
Protein Length | 301 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 638152140 |
Product | LysR family transcriptional regulator |
Protein accession | YP_776186 |
Protein GI | 115359048 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.544326 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAACGAC TTCCACCGCT CAATTGGCTA CGTGCATTCG AATCGTCAGC CCGGCACCTG AGTTTCACGC ACGCGGCGAC CGAGTTGAAT CTGACTCAGG CCGCAATCAG CCAGCAGGTG AAAGGACTTG AATCCCAGCT CGGTACGGCG TTATTCAAGC GCCTGCCGCG CGGCATCGAG TTGACCGAGG CCGGACTCGC CTACCTGCCA GTCGTGCATG AAGCGATAGA GCGGCTTGCT GCCGCCACCG ACGAGATTTT TGGGCAAGGG CATCTGAAGG TGCTGACAGT GCGAGTGAGT CTGGTGTTTT TCACGCATTG GCTCGCATGG CGTATACCGG ACTTTCGCAA GCGGTATCCG AACGTCAATC TACGCATTAC GAGCAATATC TGGGGAGGCG ATAGCAGCGT CACTGATGTC GAAGCCGATC TGGAGATCCG CTACGGGCAC GGAAAATGGA CGGGGCTGCG TGCTGAGCGA CTGACCTGGG ACACGCTGCT GCCGGTCTGT GCTCCCGGGT TGCTGTCTCC CAAAGCGCCT CTTTCGGTGC CGAAGGACCT AGCGCATTAC GAGCTGCTCC ATGTGCTCGG CTACGAGGAA GGCTGGGGAT ACTGGCTCAA AAAGGCGGGT GCATCGAAGG TCGATTCGTC GAAGGGGATG CAATTCGACA CGCTGATTTC GGCCCTGAAG GCGGCTGAAC TCGGTCAGGG CGTTGCGCTT GCAAGGTCGT CCCTCGTCGA GCACATGTTG ATTTCCGGCC AGTTGATTGC GCCACTGAAA CCACGCCTTC CAACCAGTGA GGCGTTCTAC CTCGTCTATT CCCCGCACAG TATCGTCAAT CCTCATGCGG CTGCGTTCGT CGAATGGCTC AGCGCACAGG TTCAGGGGGC CCACGCGAAA TTCTGA
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Protein sequence | MKRLPPLNWL RAFESSARHL SFTHAATELN LTQAAISQQV KGLESQLGTA LFKRLPRGIE LTEAGLAYLP VVHEAIERLA AATDEIFGQG HLKVLTVRVS LVFFTHWLAW RIPDFRKRYP NVNLRITSNI WGGDSSVTDV EADLEIRYGH GKWTGLRAER LTWDTLLPVC APGLLSPKAP LSVPKDLAHY ELLHVLGYEE GWGYWLKKAG ASKVDSSKGM QFDTLISALK AAELGQGVAL ARSSLVEHML ISGQLIAPLK PRLPTSEAFY LVYSPHSIVN PHAAAFVEWL SAQVQGAHAK F
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