| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_4293 |
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| Symbol | |
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| ID | 4313188 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008391 |
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| Strand | - |
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| Start bp | 1216126 |
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| End bp | 1217829 |
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| Gene Length | 1704 bp |
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| Protein Length | 567 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 638152134 |
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| Product | glucose-methanol-choline oxidoreductase |
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| Protein accession | YP_776180 |
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| Protein GI | 115359042 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2303] Choline dehydrogenase and related flavoproteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.485972 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGGCAG GAGAGATCAA CGAAGCCCGG GCGACGCGGT CGGTTGGCGA GTTCGACTAT
ATCGTGGTCG GAGCGGGTAC GGCTGGCTGC GCGGTCGCGA ATCGCTTGAG CGAGGACGAC
GACGTATCCG TGCTGCTGAT CGAGGCGGGT GGGAAGGATA ACTACCACTG GATTCACATT
CCGGTGGGGT ACCTCTATTG CATCGGAAAC CCACGGACCG ACTGGCGTTA CAAAACCCGT
GACGAGGCGG GACTGAACGG CAGGGCGCTG TCCTATCCGA GAGGCCGGGT TCTGGGTGGA
TGCTCGTCGA TCAACGGCAT GATCTATATG CGAGGTCAGC GTGAGGATTA CGACGAATGG
GCGCGAGTGA CGGGCGATTC GTCCTGGCAA TGGGACTCGG TGCTCGAAAC GTTCAAGAAG
AGCGAGGACT ATCACGGCGG TGCAAGTGAT GTTCATGGTG CCGGCGGCCC GTGGCGCGTA
GAAAAGCAGC GGCTGAAATG GGACATTCTC GAAACGTTCG CGCAAGCCGC CGAACAGACC
GGCATACCCG CAACGGACGA TTTCAATCGA GGCGACAACA CCGGCGTCGG ATATTTCGAC
GTCAATCAGA AGCACGGCAT TCGCTGGAAT GCGTCGAAAG GTTATCTTCG GCCAGTATCG
AAGCGGGGGA ACCTGACGAT TCTGACGAAC GCGCAGACCC GTCGACTCCT GTTCGACAAC
AAGCGCTGCG CCGGAATCGA GTTTCGTCTC GGCGACGAAC CGCGCATTGC CAAGGCAAAG
CGTGAAGTGA TCCTGTGTGC CGGCGCCGTC AATTCTCCGC AATTGCTCGA ATTGTCGGGA
ATCGGGAGTG CCGAGCGTCT GGCGAAGCTC GGAATCGAGG TGGTGCAAGA TCTGTGCGGT
GTCGGCGAGA ATCTGCAGGA TCATCTGCAA TTGCGCATGG CCTTCAAGGT AGAAGGTGTG
CGGACCCTGA ACACACTCAG TGCTTACTGG TGGGGCAAAC TGATGATCGG CCTCGAATAT
GGGCTGTTCA GAAGCGGGCC GATGGCGATG GCGCCGTCGC AGCTCGGCGT GTTTGCGAAG
TCGGACCCGA ACGATAAGAC GCTGACGCGC CCCGACGTTC AGTACCACGT GCAGCCGCTG
TCGCTCGAAC GGTTCGGCGA ACCGCTGCAT CCGTTCGACG CATTTACAGC GTCCGTTTGT
CAATTGCGAC CGTCGTCGCG CGGTAGCGTG CACATCACGT CCAATGATCC GCTGATCGCG
CCGAGTATTG CGCCCAACTA TCTGTCCACG GAGGAAGACC GCCACGTCGC GGCCAACGCG
CTGCGGCTGA CGCGGCGCAT TGTTGCGGCA CCCGCGCTCG AGCGGTTTCA CCCGCAGGAA
ATATTGCCCG GCATTCAATT CCAGACTGAG GAGGAGTTGC AGTATGCGGC CGGCAACGTC
GGAACAACCA TCTTTCATCC GGTTGGAACC TGCCGGATGG GTAGGGCGGA CGATCCGGGC
TCGGTCGTCG ATTCCAGGCT TCGCGTGCGT GGCGTGAGCG GCTTGCGGGT TGTCGATGCG
TCGGTCATGC CGACGATCAC ATCCGGCAAC ACTAATTCGC CGACGCTGAT GATCGCGGAG
CGCGCTAGCG AGATGATTCG TGCAGATCGA AAGCGGGAAG GCCGGTTGGC GGAGACAATT
CGCGGCGGAG TATTGTCGAC ATGA
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| Protein sequence | MSAGEINEAR ATRSVGEFDY IVVGAGTAGC AVANRLSEDD DVSVLLIEAG GKDNYHWIHI
PVGYLYCIGN PRTDWRYKTR DEAGLNGRAL SYPRGRVLGG CSSINGMIYM RGQREDYDEW
ARVTGDSSWQ WDSVLETFKK SEDYHGGASD VHGAGGPWRV EKQRLKWDIL ETFAQAAEQT
GIPATDDFNR GDNTGVGYFD VNQKHGIRWN ASKGYLRPVS KRGNLTILTN AQTRRLLFDN
KRCAGIEFRL GDEPRIAKAK REVILCAGAV NSPQLLELSG IGSAERLAKL GIEVVQDLCG
VGENLQDHLQ LRMAFKVEGV RTLNTLSAYW WGKLMIGLEY GLFRSGPMAM APSQLGVFAK
SDPNDKTLTR PDVQYHVQPL SLERFGEPLH PFDAFTASVC QLRPSSRGSV HITSNDPLIA
PSIAPNYLST EEDRHVAANA LRLTRRIVAA PALERFHPQE ILPGIQFQTE EELQYAAGNV
GTTIFHPVGT CRMGRADDPG SVVDSRLRVR GVSGLRVVDA SVMPTITSGN TNSPTLMIAE
RASEMIRADR KREGRLAETI RGGVLST
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