Gene Bamb_4288 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_4288 
Symbol 
ID4313183 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008391 
Strand
Start bp1211329 
End bp1212759 
Gene Length1431 bp 
Protein Length476 aa 
Translation table11 
GC content68% 
IMG OID638152129 
Productaldehyde dehydrogenase 
Protein accessionYP_776175 
Protein GI115359037 
COG category[C] Energy production and conversion 
COG ID[COG1012] NAD-dependent aldehyde dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0354203 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGCGC GCGATGCGGT GATGACCGAC TGCACGGGAG CCGGCGTAGC CGAGGTTCGG 
TCGCCCTATG ACGGCTCGAT CGTCGGCCAG GTCCGTCTGT CGCGTGCCGA CGCGGCGCCG
GCCCTCGTCG AGCGCGCGCT CGATGGCGCG CGTGCAGCCG CAGCCATGCC ACGTAGCCAG
CGCGCCGACA TCCTGTTTCG CGCGGCCGCG AGCGTGGAGG CACAAGCGGA GACATTTGCA
CGCACGATCG CGCTCGAAGC GGGCAAGCCG CTGCGGCAGG CCCGCAAGGA AGTCGCGCGC
TGCGTGAACA CGCTGCGCCT GTCGGGCGAG GAAGCGAAAC GACTCACCGG CGAGACGATC
CCGTTCGACG GGTATCCCGG CTCCGAGGAT CGCAGCGGCT ATTACACGCT GGAACCGCTG
GGCGTAATTC TCGCGATCAC ACCGTTCAAC GACCCGCTGA ACCTCGTTGC ACACAAGCTT
GGACCTGCGA TTGCGACCGG CAACGCGGTC ATCCTGAAGC CCTCGTTGCT CGCGCCGCTG
TCCGCACAGG CGCTCGTCGA GGTGCTGTGG GAAGCCGGTG CGCCGCGCGA CGCGCTGCAG
GTTGTGCACG GCGGCGCGGA GATCGCATCC GCTCTGGTGC GCGACCGGCG GATCCGGATG
GTGACCTTCA CGGGCGGCCC GCAGACCGGC GAAGCCATCA CACGCGATGC CGGCCTCAAG
AAGATCGCGA TGGACCTGGG CGGAAATGCG CCCGTGATCG TCATGGCCGA CTGCGACCTG
AAGGATGCCG CCGAATCGTG CGTGTCGGGC GCATTCTGGG CCGCAGGACA GAACTGCATC
GGCACGCAGC GAATCTTCGT CGCCGAAGCC GCGTACGAGC CGTTCGTCCG GTATTTCGTC
GAACTGACCG GCAGGATGGT CGTCGGCGAT CCGCTGGACG ACGCGACCGA CATGGGGCCG
ATGATCGGCG AGGAACAGGC GATCCGTATC GAACGCTGGG TCGACGAAGC CGTGTCGTGT
GGCGCGACAG TGCTGACCGG CCATCGGCGG CGCGGGGCAC TGTACGAACC GACGGTGCTC
GCGGACGTGC CGCACGACGC GCGCGTATGG ACCGACGAGG TATTCGCGCC GGTCGTGACG
ATCGAGAAAT TCGCCGACCT GCAGCAGGCG TTCGACGCGG CCAACGCGTC GGAGAGCTGC
CTGCATGCAG GCGTGTTCAC CGGCAGCCTG GAGGTGGCGC TCGGCGCGGC CGAGCGCCTG
CAGGCGGGCG GCGTGATGAT CAACGATTCG TCCGATTACC GCTTCGACGG CATGCCGTTC
GGCGGATTCA AGCATGGGTC GCTGGGCCGC GAAGGCGTTC GGTTCGCGAT GACGGAAATG
ACGCAGCCGA AGGTGGTCTG CTTCAGGCGC AACCGGTGGC TGTCGAGCTG A
 
Protein sequence
MSARDAVMTD CTGAGVAEVR SPYDGSIVGQ VRLSRADAAP ALVERALDGA RAAAAMPRSQ 
RADILFRAAA SVEAQAETFA RTIALEAGKP LRQARKEVAR CVNTLRLSGE EAKRLTGETI
PFDGYPGSED RSGYYTLEPL GVILAITPFN DPLNLVAHKL GPAIATGNAV ILKPSLLAPL
SAQALVEVLW EAGAPRDALQ VVHGGAEIAS ALVRDRRIRM VTFTGGPQTG EAITRDAGLK
KIAMDLGGNA PVIVMADCDL KDAAESCVSG AFWAAGQNCI GTQRIFVAEA AYEPFVRYFV
ELTGRMVVGD PLDDATDMGP MIGEEQAIRI ERWVDEAVSC GATVLTGHRR RGALYEPTVL
ADVPHDARVW TDEVFAPVVT IEKFADLQQA FDAANASESC LHAGVFTGSL EVALGAAERL
QAGGVMINDS SDYRFDGMPF GGFKHGSLGR EGVRFAMTEM TQPKVVCFRR NRWLSS