Gene Bamb_4287 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_4287 
Symbol 
ID4313182 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008391 
Strand
Start bp1210451 
End bp1211248 
Gene Length798 bp 
Protein Length265 aa 
Translation table11 
GC content63% 
IMG OID638152128 
ProductABC transporter related 
Protein accessionYP_776174 
Protein GI115359036 
COG category[E] Amino acid transport and metabolism 
COG ID[COG4598] ABC-type histidine transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0485739 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCAGCAG CAATTCCTGC ATGCAAACCG GCGGCTGACG CGCTGGTGGT CGAGGATATT 
CACAAGTCGT TTGGCGGTGT CGAGGTGCTG AAGGGCATCT CGTTGACCGC GAGGAATCAC
GAGGTTGTGT CGATCCTCGG CAGCAGCGGG TCGGGCAAAA GTACGTTCCT CAGGTGCATC
AACTTGCTGG AAATGCCCGA CCGTGGCCGG ATCTGCGTGA ATGGCGAAAC GCTCGCGCTG
AAACAGGCGG GCCGCGACGG CGCGCTCGTC GCGGCCGACG CGCGGCAGGT GATGCGCGTG
CGCCGCAAGC TCGCGATGGT GTTCCAGCAG TTCAATCTCT GGGCACACAT GACCGTGCTG
CAGAACGTGA TGTTCGTGCC GGTGCGCGTG CTCGGCGTGC CGAAGCGCGA CGCCCGCGAC
AAGGCGATTG CGATGCTCGA ACGCGTCGGG CTCGCCGGCA AGTGCGAACA CTATCCGAAC
CAGCTGTCGG GCGGCCAGCA GCAGCGCGTT GCGATTGCAC GAGCGCTCGC GACCGACCCC
GACGTGATGC TGTTCGACGA GCCGACGTCG GCACTCGATC CGGAGCTCGT CGGCGAAGTA
TTGAAAGTGA TGCGCTCGCT GGCCGACGAG GGACGCACGA TGCTCGTCGT CACACACGAG
ATGGGGTTTG CGCGCGAAGT CGCGAACCGC GTCGTGTTCG TCCACCAGGG ACGAATCGAG
GAAGACGGCA GTCCCGATGA GGTGTTCGCG AGCCAGAAAT CACCGCGTTT CCAGAAGTTT
CTGTCCAGCA TCATTTGA
 
Protein sequence
MPAAIPACKP AADALVVEDI HKSFGGVEVL KGISLTARNH EVVSILGSSG SGKSTFLRCI 
NLLEMPDRGR ICVNGETLAL KQAGRDGALV AADARQVMRV RRKLAMVFQQ FNLWAHMTVL
QNVMFVPVRV LGVPKRDARD KAIAMLERVG LAGKCEHYPN QLSGGQQQRV AIARALATDP
DVMLFDEPTS ALDPELVGEV LKVMRSLADE GRTMLVVTHE MGFAREVANR VVFVHQGRIE
EDGSPDEVFA SQKSPRFQKF LSSII