Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bamb_4287 |
Symbol | |
ID | 4313182 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria AMMD |
Kingdom | Bacteria |
Replicon accession | NC_008391 |
Strand | - |
Start bp | 1210451 |
End bp | 1211248 |
Gene Length | 798 bp |
Protein Length | 265 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 638152128 |
Product | ABC transporter related |
Protein accession | YP_776174 |
Protein GI | 115359036 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG4598] ABC-type histidine transport system, ATPase component |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.0485739 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCCAGCAG CAATTCCTGC ATGCAAACCG GCGGCTGACG CGCTGGTGGT CGAGGATATT CACAAGTCGT TTGGCGGTGT CGAGGTGCTG AAGGGCATCT CGTTGACCGC GAGGAATCAC GAGGTTGTGT CGATCCTCGG CAGCAGCGGG TCGGGCAAAA GTACGTTCCT CAGGTGCATC AACTTGCTGG AAATGCCCGA CCGTGGCCGG ATCTGCGTGA ATGGCGAAAC GCTCGCGCTG AAACAGGCGG GCCGCGACGG CGCGCTCGTC GCGGCCGACG CGCGGCAGGT GATGCGCGTG CGCCGCAAGC TCGCGATGGT GTTCCAGCAG TTCAATCTCT GGGCACACAT GACCGTGCTG CAGAACGTGA TGTTCGTGCC GGTGCGCGTG CTCGGCGTGC CGAAGCGCGA CGCCCGCGAC AAGGCGATTG CGATGCTCGA ACGCGTCGGG CTCGCCGGCA AGTGCGAACA CTATCCGAAC CAGCTGTCGG GCGGCCAGCA GCAGCGCGTT GCGATTGCAC GAGCGCTCGC GACCGACCCC GACGTGATGC TGTTCGACGA GCCGACGTCG GCACTCGATC CGGAGCTCGT CGGCGAAGTA TTGAAAGTGA TGCGCTCGCT GGCCGACGAG GGACGCACGA TGCTCGTCGT CACACACGAG ATGGGGTTTG CGCGCGAAGT CGCGAACCGC GTCGTGTTCG TCCACCAGGG ACGAATCGAG GAAGACGGCA GTCCCGATGA GGTGTTCGCG AGCCAGAAAT CACCGCGTTT CCAGAAGTTT CTGTCCAGCA TCATTTGA
|
Protein sequence | MPAAIPACKP AADALVVEDI HKSFGGVEVL KGISLTARNH EVVSILGSSG SGKSTFLRCI NLLEMPDRGR ICVNGETLAL KQAGRDGALV AADARQVMRV RRKLAMVFQQ FNLWAHMTVL QNVMFVPVRV LGVPKRDARD KAIAMLERVG LAGKCEHYPN QLSGGQQQRV AIARALATDP DVMLFDEPTS ALDPELVGEV LKVMRSLADE GRTMLVVTHE MGFAREVANR VVFVHQGRIE EDGSPDEVFA SQKSPRFQKF LSSII
|
| |