| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_4286 |
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| Symbol | |
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| ID | 4313181 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008391 |
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| Strand | - |
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| Start bp | 1209640 |
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| End bp | 1210419 |
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| Gene Length | 780 bp |
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| Protein Length | 259 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 638152127 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_776173 |
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| Protein GI | 115359035 |
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| COG category | [E] Amino acid transport and metabolism
[T] Signal transduction mechanisms |
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| COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
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| TIGRFAM ID | [TIGR01096] lysine-arginine-ornithine-binding periplasmic protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.0413144 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGAAGC TGCTTCAGTC GCTGTGCGTG GGCGCGGCAT TGCTCGGATC GGTCGCGCAT
GCCGAGCAGG TCGTGCGGGT CGGCACGCTC GCCGATTACG CGCCGTTCGA ATACAAGGAT
GCATCAGGCA AGCTGCAGGG CATGGAGATC GATATCGGCA AGAAGATGTG CGACACGATG
AAGGTCAAGT GCCAGTGGGT GACGATGGAT TTCGACGCGC TGATTCCGGC ACTCAAGGCG
AAGCAGATCG ATGCGGTGCT CGCGCAAATG TCGAAGACGC CGGAGCGTGA GCAGTCGGTG
GACTTCACGC GCATCTTCAC GACGGCGCCC GTGCAGTTCG TCGCGAAGCA GGGCTCGGGC
GTCACGGACA ACGCCGCCAC GCTGCGCGGC AAGACGATCG GCGTTCAGAC GGCGTCGACG
CACGAATCCT ATCTGCGCCG CCGCCTGCCG GCGAGCAAGT CGGGGATCAA CGTGAAGGTC
TATCAGACGC TCGACGAAGC CTGGCTCGAT CTCGAGGCCG GACGCGTCGA TGCGGTGTTT
GCCGACAACA CGGTCGCGTA CGACTGGCTG ACGAAGGCCG GCAGGAAGGA AGGCTTCGAC
TTCGTCGGCA AGCCGATCGC CGATGCGGAG ATCTTCGGCG ACGGTACGGC GATCGCGGTA
CGCAAGGGCG ACGCGCCGCT GAAGGCGCTG TTCGACAAAG GCATCGCGCA GGTGCAGGCG
GATGGCACGT TCGCCGCAGC CAACAAGCGC TATTTCCCGT TCAGCATCGC GCCGCAATAA
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| Protein sequence | MKKLLQSLCV GAALLGSVAH AEQVVRVGTL ADYAPFEYKD ASGKLQGMEI DIGKKMCDTM
KVKCQWVTMD FDALIPALKA KQIDAVLAQM SKTPEREQSV DFTRIFTTAP VQFVAKQGSG
VTDNAATLRG KTIGVQTAST HESYLRRRLP ASKSGINVKV YQTLDEAWLD LEAGRVDAVF
ADNTVAYDWL TKAGRKEGFD FVGKPIADAE IFGDGTAIAV RKGDAPLKAL FDKGIAQVQA
DGTFAAANKR YFPFSIAPQ
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