| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_4284 |
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| Symbol | |
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| ID | 4313179 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008391 |
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| Strand | - |
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| Start bp | 1208182 |
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| End bp | 1208877 |
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| Gene Length | 696 bp |
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| Protein Length | 231 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 638152125 |
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| Product | polar amino acid ABC transporter, inner membrane subunit |
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| Protein accession | YP_776171 |
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| Protein GI | 115359033 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG4160] ABC-type arginine/histidine transport system, permease component |
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| TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.138969 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACGACT TTCTTTCCCT CATCGTGCAG TCCGGCCCGG ACGTCGCGCG CGGCATATGG
ATCACGCTCG AACTGCTGGT GCTGTCATGC ACGCTCGCGT TCGCGCTCGC GGTGCCGCTG
GCTGTCGCGC GCACGTCGGC ATGCCGGTGG CTGTCGACAC CGACCCGCCT GTTCATGTCG
GTGTTTCGCG GCACGCCGCT GCTGGTGCAG ATTTTCGTGC TGTATTACGG GCTCGCGCAG
TTCTCGATCG TGCGCGCGTC GCCTCTGTGG CTGCTGGTCG GCGGATCGTT CTCGTGTGCG
TTGTGCGCGC TGACGCTCAA TCTCGCGGCG TACATGGCTG AAGACATCCG CGGCGGGATC
GCCGGCGTTC CCGCCGGCGA GAAGGAGGCC GCGCTCGCGT TCGGGATGAG CCGCTTCATG
CTCACCTGGT TCGTGATCGT GCCGCGCGCG ATCGGCATCG TCGCACCGAC GCTCGGCAAT
GAGATCGTGC TGCAACTGAA GTCGACCGCG CTTGCCAGCA CGATCACCGT GCTCGACCTG
ACCGGTGTCG CGCGACGCAT CTCGATCGAA ACCTATACGA CCGACGCGCT GATGCTGGCC
GGCATCGTGT ACGTCGGTAT CACGGCTGTG CTTTCGACCG TGCTCAAGCG CGTCGAAGGT
TTGCTGAATC GCCATCTGGG CAGCGTGCGT GCTTGA
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| Protein sequence | MNDFLSLIVQ SGPDVARGIW ITLELLVLSC TLAFALAVPL AVARTSACRW LSTPTRLFMS
VFRGTPLLVQ IFVLYYGLAQ FSIVRASPLW LLVGGSFSCA LCALTLNLAA YMAEDIRGGI
AGVPAGEKEA ALAFGMSRFM LTWFVIVPRA IGIVAPTLGN EIVLQLKSTA LASTITVLDL
TGVARRISIE TYTTDALMLA GIVYVGITAV LSTVLKRVEG LLNRHLGSVR A
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