Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bamb_4275 |
Symbol | |
ID | 4313170 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria AMMD |
Kingdom | Bacteria |
Replicon accession | NC_008391 |
Strand | + |
Start bp | 1199695 |
End bp | 1200456 |
Gene Length | 762 bp |
Protein Length | 253 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 638152116 |
Product | cell wall hydrolase/autolysin |
Protein accession | YP_776162 |
Protein GI | 115359024 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0860] N-acetylmuramoyl-L-alanine amidase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.126067 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACACACC GAACCGTTCG ACGCCTTCGC CCGTTCGCTC GCGCCGCCGC GCGCCTGCTC GCGTGCGCCC CGCTGCTGGC CGCGCCGCCG GCGCTGCATG CGGCCGATGC CGCCAGCCCG GACGCGCAGC CCGCGTCCGG CCGCTACATC GTCGTCGACA CCGGCCATAC GCCGGCCCGC CCGGGTGCAA CCGGCGCGAG CGGCCGCGTC GAATACCGGT ACAACCTCGA TCTGTCCACC GCCGTCGCCG AGAAGCTCGC CACGCACGGC GACCGCGTGC TGCGTACGTC GGCCGACGGC CGCGAGATCA CGCTCGACCA GCGTTCGACG CAGGCGCCCG ACGCGAACCT GTTCGTGTCG ATCCATCACG ATTCGATGCA GCAGCAGTTC ATCGACGCGG GGCGGCAACG CGAATTCCGC GGTTTCGCCG TGTTCGTGTC GGAACGCAAT CCGCACTATG CGGAAAGCCT GCGTTGCGCG AAGTCGATCG CCGAGCGGCT GATCGCGGCC GGCGAACGGC CGTCGCTGTA TCACGCGCAG CCGATCAAGG GCGAGAACCG CCCGCTGATC GATCCGCAAC TCGGCATCCA TCGCTTCGAC GATCTCGTCG TGCTGCGCAC CGCACCGATT CCGGCCGTGC TGGTCGAGGC CGGCGTGATC GTCAATCCCG ACGAGGAAAA GCGTCTCGCG CAGCGCGAGA CGATCCAGCG TCTCGCCACC GCGATCGCGG GCGGGATCGA TGCGTGTACG GCGGCAAGGT AG
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Protein sequence | MTHRTVRRLR PFARAAARLL ACAPLLAAPP ALHAADAASP DAQPASGRYI VVDTGHTPAR PGATGASGRV EYRYNLDLST AVAEKLATHG DRVLRTSADG REITLDQRST QAPDANLFVS IHHDSMQQQF IDAGRQREFR GFAVFVSERN PHYAESLRCA KSIAERLIAA GERPSLYHAQ PIKGENRPLI DPQLGIHRFD DLVVLRTAPI PAVLVEAGVI VNPDEEKRLA QRETIQRLAT AIAGGIDACT AAR
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