| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_4265 |
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| Symbol | |
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| ID | 4313160 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008391 |
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| Strand | + |
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| Start bp | 1188049 |
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| End bp | 1189506 |
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| Gene Length | 1458 bp |
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| Protein Length | 485 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 638152106 |
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| Product | GntR family transcriptional regulator |
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| Protein accession | YP_776152 |
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| Protein GI | 115359014 |
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| COG category | [E] Amino acid transport and metabolism
[K] Transcription |
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| COG ID | [COG1167] Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.0310844 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCCGTT CCGTGCAAAG CCCTGCTCCG CCCGCGCCGT CGCGCACGCG CGTGGAAACC
GTGATGGACA CGCTGCGCGC GCGGATCGCG AGCCGCGCGC TGATGCCCGG CGCGCGCGTG
CCGTCGATCC GGATGATGGC CGATGGGCTG CACGTGTCGA AATCGACCGT CGTCGATGCA
TACGAGCGGC TCGCGAGCGA AGGCGTGCTG GTCGCGCGGC GCGGCTCCGG CTTCTACGTG
TCGGGCCATG CGCCGCCGCT CGCGCTCGCC GAGCTCGGCC CGCGCCTCGA CCGCGAACTC
GATCCGCTGT GGCTGTCGCG CCAGTCGCTC GAGGCGGCGC CGAATTCCGT GAAGCCCGGC
TGCGGCTGGC TGCCGTCGTC GTGGCTACCG GACGAGAGCC TGCGCCGCGC GCTGCGCGCG
GTATCGCGCG ACGAACCCGA CGCGCTGACC GACTACGCGA CGCCGCTCGG GCTGCCCGCG
TTGCGCCAGC AGCTCGCGTG GCGGCTCGCG CAGCACGGCG TCCAGGCGGA GCCCGCGCAG
ATCATGCTGA CCGACGGCGG CACGCATGCG CTCGATCTCG TGTGCCGGCT GCTGCTGGAG
CCGGGCGACA CCGTCGTGCT CGACGATCCG TGCTACTTCA ACTTCCAGGC GCTGCTGCGC
GCGCATCGCG CGCGGATCGT CAGCGTGCCG TACACGCCGA ACGGCCCCGA TCTCGCGCGC
TTCGAACAGG TGCTCGCCGA GCACCGGCCG CGCCTGTACA TCACCAACTC GGCGCTGCAC
AACCCGACCG GCGCGACGCT CGCGCCGCCG GTCGCGCACC GGCTGCTGAC GCTGGCGGCC
GAGCACGGCC TGCTGATCGT CGAGGACGAC ATCTTCGCGG ATTTCGAAAG CACGCCCGCG
CCGCGCCTCG CCGCGTTCGA CGGGCTGTCG CGCGTCGTGT CGATCGGCAG CTTCTCGAAA
ACGCTGTCGG CCGCGATCCG CTGCGGCTAT GTCGCCGCAC GCCCCGAGTG GATCGACGCG
CTCGTCGACC TGAAGCTCGC GACGTCGTTC GGCAACGCGC AGATCGGCGC GAACGTCGTG
CATCGGCTGC TGGTCGACGG CACGTATCGG CGCCATCTCG ACAGCCTGCG TGCGCAACTG
GCCGATGCGA TGGGCGAAAC GATCCGGCGG CTCGCGCGCG CCGGGCTCGG GATCTGGACG
GAGCCGCGCG GCGGCCTGTT CGTGTGGGCG GAGCTGCCGG ACGGGCTCGA TGCGGCGCGC
GTCGCGCGTC ATGCGCTCGA TCATGATGTC GTGCTCGCGC CAGGCGATGT GTTCAGCGCG
TCGCACAGCG CGACGTCGTT CATGCGCTTC AACGTGTCGC GCTGCAAGGG GCCGGCCGTA
TTCGATGCGC TGGCGCGGGC GATGGACGCG GCGCGGGTGG CCGAACGCCA CGGCCGCACG
CTGGCCGACC AACGATGA
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| Protein sequence | MSRSVQSPAP PAPSRTRVET VMDTLRARIA SRALMPGARV PSIRMMADGL HVSKSTVVDA
YERLASEGVL VARRGSGFYV SGHAPPLALA ELGPRLDREL DPLWLSRQSL EAAPNSVKPG
CGWLPSSWLP DESLRRALRA VSRDEPDALT DYATPLGLPA LRQQLAWRLA QHGVQAEPAQ
IMLTDGGTHA LDLVCRLLLE PGDTVVLDDP CYFNFQALLR AHRARIVSVP YTPNGPDLAR
FEQVLAEHRP RLYITNSALH NPTGATLAPP VAHRLLTLAA EHGLLIVEDD IFADFESTPA
PRLAAFDGLS RVVSIGSFSK TLSAAIRCGY VAARPEWIDA LVDLKLATSF GNAQIGANVV
HRLLVDGTYR RHLDSLRAQL ADAMGETIRR LARAGLGIWT EPRGGLFVWA ELPDGLDAAR
VARHALDHDV VLAPGDVFSA SHSATSFMRF NVSRCKGPAV FDALARAMDA ARVAERHGRT
LADQR
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