| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_4251 |
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| Symbol | |
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| ID | 4313146 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008391 |
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| Strand | + |
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| Start bp | 1176556 |
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| End bp | 1177743 |
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| Gene Length | 1188 bp |
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| Protein Length | 395 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 638152092 |
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| Product | cystathionine beta-lyase |
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| Protein accession | YP_776138 |
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| Protein GI | 115359000 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0626] Cystathionine beta-lyases/cystathionine gamma-synthases |
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| TIGRFAM ID | [TIGR01324] cystathionine beta-lyase, bacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.344973 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.00449995 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | TTGAATCCCC TGCATTCGCC CGACACCCTG CTCGCTCACG AAGGCCGCTC GCACGGCCAG
CCCGGTTCGC CGGTGAACCC GCCCGTGTAC CGCCAGTCGA CGCTGCTCTT TCACGGCACC
GGCGCGCTCG ACGCCGTGCG CGGCACGCCG CTCGCGTACG GACGCCACGG CAGCCCGACC
ACGCGGGCGC TCGAAAAGGC GCTGGCACGC CTCGAAGGCG CACATGCCGC GCTGCTGACG
CCGAGCGGGC TCAGCGCGAT CACGACCGCG CTGCTCGCGG TGCTGAATCC CGGCGATCAT
CTGCTGATGG CCGATTCCGT GTACGACCCG ACCCGCTCGT TCTGCGACGA GACGCTCGCG
CGCCTCGGCA TCGAGACGAC TTACTACGAT CCGTCGATCG GCGCCGGCAT CGCGGCGCTG
ATGCGGCCGA ACACGCGCGC GGTATTTACC GAATCGCCGG GCTCGCTGAC GTTCGAGGTG
CAGGACATCC CTGCGATCTG CCGCGTCGCG CACCAGCACG GCGCAGTCGT GCTGCTCGAC
AACACGTGGG GCACGCCACT GAATTTCCGC TCGTTCTCGC ACGGCGTCGA CGTGTCGATC
CACGCGGCGA CCAAATACAT CGCCGGACAC TCCGACGTAC TGATGGGCGT GATCCTGACG
ACCGAAGCGC TCGCGCAGCA GGTGACGCGC TGCTACCGGC AGCTCGGGAT GACCGTCAGC
GGCGACGATG CGTATCTCGC GCTGCGCGGG CTGCGCACGC TGTCGGTGCG CCTCGAACGC
CACCAGCGCA ATGCGCAGGT GCTGACCGAC TGGCTCGCGC GGCAGCCGGA AGTCGCGCAG
ATCCTGTATC CCGCGCGGCC GGGCGACGCC GGCCACGCAC TGTGGCAGCG CGATTTCACG
GGTGCGTGCG GATTGTTCGG CCTGGTGCTG CATCCGCAGC CCGACGAGGC GGTGCGCGCG
CTGCTCGACG GCATGACGTG CTTCGGCATG GGCTACAGCT GGGGCGGCTT CGAAAGCCTG
ATCATCCCGT CGAATCCGTC GCGCCAGCGC ACCGCCACGC AATGGAACGC GGCCGGCCCG
CTGCTGCGCA TTCACGCGGG GCTCGAGCAT CCGGACGACA TGATCGCCGA CCTCGATGCC
GGCTTCGCGA GAATGCGCGC CGCCGCGGCC GCGCTCGCGG AATCCTGA
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| Protein sequence | MNPLHSPDTL LAHEGRSHGQ PGSPVNPPVY RQSTLLFHGT GALDAVRGTP LAYGRHGSPT
TRALEKALAR LEGAHAALLT PSGLSAITTA LLAVLNPGDH LLMADSVYDP TRSFCDETLA
RLGIETTYYD PSIGAGIAAL MRPNTRAVFT ESPGSLTFEV QDIPAICRVA HQHGAVVLLD
NTWGTPLNFR SFSHGVDVSI HAATKYIAGH SDVLMGVILT TEALAQQVTR CYRQLGMTVS
GDDAYLALRG LRTLSVRLER HQRNAQVLTD WLARQPEVAQ ILYPARPGDA GHALWQRDFT
GACGLFGLVL HPQPDEAVRA LLDGMTCFGM GYSWGGFESL IIPSNPSRQR TATQWNAAGP
LLRIHAGLEH PDDMIADLDA GFARMRAAAA ALAES
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