| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_4247 |
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| Symbol | |
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| ID | 4313142 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008391 |
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| Strand | - |
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| Start bp | 1172822 |
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| End bp | 1173874 |
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| Gene Length | 1053 bp |
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| Protein Length | 350 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 638152088 |
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| Product | IS605 family transposase OrfB |
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| Protein accession | YP_776134 |
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| Protein GI | 115358996 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0675] Transposase and inactivated derivatives |
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| TIGRFAM ID | [TIGR01766] transposase, IS605 OrfB family, central region |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.866566 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.0328861 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCCTTG TCTACCGCTA TCGCGTGAAG TCGCTCAACG GACTGCTCAA CAAGCAGAGC
CGTGCGGTGA ACTACGTCTG GAACTTCTGC AATGACACGC AGAAGCACGC GCTCAAGTGG
AGCAAGAAAT GGCCGACGGG ATTCGATCTG AACGTGCTGA CGACGGGGAG CAGCAAGGCG
CTCGGCATCC ACTCCGGCAC GATCAACGCG ACGTGCGAGC AATATGCGAA GTCGCGCAGT
CAGCACCGTC GGCCCTACCT GCGCTATCGC GGCAGGAAAT CGCTGGGCTG GGTGCCGCTG
AAGGGGCGTG ACCTGAAGCG CGAAGGCGAT GCGTTTCGTT TTGCCGGTAA CACGTTTCGC
GTGTTCAACA GCCGCCCACT TCCTGAAGGC AAGATCAAGG ATGGGACCAA CTTTGCGCAG
GATGCACGCG GCAACTGGTT CTTGAATATC GTGATCGAGA TGCCCGATGT TCAGGCCCGC
CCGGTCCGTT CCGGTGTTGG CATCGATCTC GGCCTGAAAG ACTTCGCCAC ACTTTCGACG
GGCGAGAAGC TGCCCAATGA CCGATTCGGC CGACGCGCGG CGGAGAAACT GGCGAAAGCG
CAACGGGCGC GAAAGCACAA GCGGCATATC GCGAAGTTGC ACGCCAAAGT GGCGAATGCC
CGTGCCGATT TCCAGCACAA GCTCGCGCTC GATCTGGTGC GGCGTTTCGA TTACATCGCG
GTCGGCAACG TATCTGCCGC CAAACTTGCC AGAACCAGGA TGGCGAAAAG CGTCTACGAC
GCATCCTGGT CGTCCTTCCG AAACAAGCTC CGCTACAAAG CGATCGCGCA CGGAGCCACG
TTTGAGGAAG TCGACGAAAG CGGTTCTACC CAGTCCTGTT CGGCGTGCGG GTCGAAAGAC
AGCACGACGC GGCCGAAAGG TATCGCGGGA CTGCGAATGA GAGAGTGGGC CTGCGATGGC
TGTGGTGTCG TGCATGATCG AGATATCAAC GCTGCGCTGA ACATTCTCCG ATGCGGACGT
GCATCGCCAG GTGTGGGAAT CACCTGCCTT TAG
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| Protein sequence | MILVYRYRVK SLNGLLNKQS RAVNYVWNFC NDTQKHALKW SKKWPTGFDL NVLTTGSSKA
LGIHSGTINA TCEQYAKSRS QHRRPYLRYR GRKSLGWVPL KGRDLKREGD AFRFAGNTFR
VFNSRPLPEG KIKDGTNFAQ DARGNWFLNI VIEMPDVQAR PVRSGVGIDL GLKDFATLST
GEKLPNDRFG RRAAEKLAKA QRARKHKRHI AKLHAKVANA RADFQHKLAL DLVRRFDYIA
VGNVSAAKLA RTRMAKSVYD ASWSSFRNKL RYKAIAHGAT FEEVDESGST QSCSACGSKD
STTRPKGIAG LRMREWACDG CGVVHDRDIN AALNILRCGR ASPGVGITCL
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