| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_4238 |
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| Symbol | |
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| ID | 4313133 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008391 |
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| Strand | + |
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| Start bp | 1163813 |
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| End bp | 1165228 |
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| Gene Length | 1416 bp |
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| Protein Length | 471 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 638152079 |
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| Product | major facilitator transporter |
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| Protein accession | YP_776125 |
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| Protein GI | 115358987 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.747495 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.251377 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGTCTT TACCGCGCGC CCTGCTCATG TCGCCCGTCT TTCTAGCACC GCTCATCGTT
GCCTGTGCGT TGTTCATGGA AAGCGTCGAC GCGAACATCA TCGTCACCGC ACTCCCCGCG
ATGGCGAGGG ACTTCGGACA CAATCCCGTC ACACTGAACA TCGCGATCAC GGCCTACGTG
GTCGGCCTCG GCGTCTTCAT CCCGATCTGC GGATGGCTCG CCGACCGCTT CAGCGCGCGC
TCCGTATTCC GCACCGCGAT CGGCATCTTC GTCGTCGGCT CGCTGATGTG CGCGGCCTCC
AACTCCCTCG GCGTGCTCAC GTTCGCGCGC TTCGTGCAGG GCGTCGGCGG CGCGATGATG
GTGCCGGTCG GCCGGATCAT CATCTTCCGC GCGGTGCCGC GCTCCGATCT CGTGCGCGCG
ATGAACTACC TCGCGATTCC CGCGCTGTTC GGGCCCACGC TCGGGCCGCT CGTCGGCGGC
TTCATCACGA CCTACCTGCA CTGGCGGATG ATCTTCTTCA TCAACGTGCC GATCGGCATC
TACGGGATCT ACGTCGCCAG CAAGCACATC GCGAACACGC ACGAGCCCGA CCCGGGCCCG
CTCGACTGGT TCGGCTTCCT GCTGTCGGCG AGCGGCGCCG CGCTGCTGCT GATGGGCCTC
ACGCTGATCG ACGGCTCGCT CACGTCGCGC GGCAACGCGC TCATGATGTG CGCGGCCGGC
GCGGTGATGC TCGCGCTCTA CGTGCCGTAC GCGCGCCGCA AGGAACGGCC CGTGCTCGAC
CTCAGTTTCC TGAAGATTCC GACCTACCAC GCGAGCGTGG TCGGCGGGTC GCTGTTCCGC
ATCGGCCTCG GCGCGGTGCC GTTCCTGCTG CCGCTCGCGC TGCAGGAAGG CCTCGGCATG
AGCGCGTTCC ACTCCGGGCT GATCACGTGC GCATCCGCGC TCGGCGGCGC GGTGAGCCGC
TCGACGGCCA CCCATACGCT GCGCCGCTTC GGCTTTCGCA CGGTGCTGAT CTACAACGCC
GCGTTCGCGG GGCTCGCGAT CGCCGCATAC GGCGTGTTCC ATCCGGGCAT GCCCACCTGG
GCAATCTGGA TGATCGTGCT GGTCGGCGGC ATCTTCCCCG CGCTGCAGTT CACGAGCCTG
AATTCGATGA TCTACGCGGA TATCTCGCAG GCCGACGCGG GCCGCGCGAC GAGCCTCGGC
AGCGTCGTGC AGCAGATGTC GCTCGGGCTC GGCGTGACGG TCGCCGGCCT CGTGCTGCAC
GTATCGCACT GGCTGCAGGG CCATCAGACG ATGGTGTGGT CGGATTTCTG GCCCGCGTTC
GTCGTGGTCG GGCTGTGTTC GTTCGCGTCG ATTCCGATCA CGCGGCGGCT GCCGCCGGGC
GCCGGCGACG AAGTCGCGCG CGGCAAGCGG CAATGA
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| Protein sequence | MASLPRALLM SPVFLAPLIV ACALFMESVD ANIIVTALPA MARDFGHNPV TLNIAITAYV
VGLGVFIPIC GWLADRFSAR SVFRTAIGIF VVGSLMCAAS NSLGVLTFAR FVQGVGGAMM
VPVGRIIIFR AVPRSDLVRA MNYLAIPALF GPTLGPLVGG FITTYLHWRM IFFINVPIGI
YGIYVASKHI ANTHEPDPGP LDWFGFLLSA SGAALLLMGL TLIDGSLTSR GNALMMCAAG
AVMLALYVPY ARRKERPVLD LSFLKIPTYH ASVVGGSLFR IGLGAVPFLL PLALQEGLGM
SAFHSGLITC ASALGGAVSR STATHTLRRF GFRTVLIYNA AFAGLAIAAY GVFHPGMPTW
AIWMIVLVGG IFPALQFTSL NSMIYADISQ ADAGRATSLG SVVQQMSLGL GVTVAGLVLH
VSHWLQGHQT MVWSDFWPAF VVVGLCSFAS IPITRRLPPG AGDEVARGKR Q
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