| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_4225 |
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| Symbol | |
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| ID | 4313120 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008391 |
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| Strand | - |
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| Start bp | 1146676 |
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| End bp | 1147605 |
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| Gene Length | 930 bp |
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| Protein Length | 309 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 638152066 |
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| Product | YscJ/HrcJ family type III secretion apparatus lipoprotein |
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| Protein accession | YP_776112 |
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| Protein GI | 115358974 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4669] Type III secretory pathway, lipoprotein EscJ |
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| TIGRFAM ID | [TIGR02544] type III secretion apparatus lipoprotein, YscJ/HrcJ family |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.156632 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCATGTGC CAAACGGGCC GCGCGCCCTG AGTGGACAAA CGATGACGAC GATCGATTCG
ACGCCGCGCA TGCATGCGTG GCGCAGCCGG GCGGCGCGTG CGCTGCTCGC GGGGCTGCTC
GCGCTGCTGG CCGGCTGCCA GAAGGAGCTT TACTCCGGCC TGTCGGAGCG CGACGCGAAC
CAGATGGTCG CCGTGCTCGG CGACGCGGGC ATCAGCGCGT CGAAGGACAA CGACGCGCGT
GACACGTCGG ATCGCAACGC GTGGCTCGTG AGCGTCGCGG ACGGCGACAT GCAGTCGGCG
CTGACCGTGC TGCAGGCGAA CGGGTTGCCG AAGCCGAGCT ATGCGAGCCT CGGCGAGCTG
TTCCAGAAGC AGGGGCTCGT CTCGACGCCG GCCGAGGAGC GCGTGCGCTA TCTGTACGGC
GTGTCGCAGG ACCTGTCGCG CACGCTGCAG GACATCGAGG GCGTGGTGGT CGCGCGCGTG
CAGGTCGTGA TTCCGGAGAA CGATCCGCTC GCGGACAAGA TCAAGCCGTC GTCGGCGGCC
GTGTACATCC GCTACCGGCC CGGCGTGGAC CTGCGCGCGA TGGCGCCGAT GGTCAAGGAT
CTCGTCGCGC ACAGCATCGA GGGGCTGCAG TACGACAACG TATCGCTGTT CCTGCAGCCG
GCCGCCGCGC GCACGACGCG CGTGGACGGC ATCGGCAGCG CGGTGTCGGA CATCCTGCGG
CTGCGCTCGC CGCTGGGCTG GCTGGTGTTC GCGCTGATCC TGCTGACCTG CGCGGTGATC
GCGCTGTCGG CCGCGCGGCG CGGAATGTTC GGCGCGCGGC TGGCCGGGCT GGTCGGCACG
CCGCGCGGCG CGAACGGGGC CGGCGGCGGA GCCGCGCAGT CGGGCGGCGG CAGCCTGCGC
ACGCCGGACG GCGCGCGCGA CGGCGCATGA
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| Protein sequence | MHVPNGPRAL SGQTMTTIDS TPRMHAWRSR AARALLAGLL ALLAGCQKEL YSGLSERDAN
QMVAVLGDAG ISASKDNDAR DTSDRNAWLV SVADGDMQSA LTVLQANGLP KPSYASLGEL
FQKQGLVSTP AEERVRYLYG VSQDLSRTLQ DIEGVVVARV QVVIPENDPL ADKIKPSSAA
VYIRYRPGVD LRAMAPMVKD LVAHSIEGLQ YDNVSLFLQP AAARTTRVDG IGSAVSDILR
LRSPLGWLVF ALILLTCAVI ALSAARRGMF GARLAGLVGT PRGANGAGGG AAQSGGGSLR
TPDGARDGA
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