Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bamb_4222 |
Symbol | |
ID | 4313117 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria AMMD |
Kingdom | Bacteria |
Replicon accession | NC_008391 |
Strand | - |
Start bp | 1143946 |
End bp | 1145331 |
Gene Length | 1386 bp |
Protein Length | 461 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 638152063 |
Product | type III secretion apparatus H+-transporting two-sector ATPase |
Protein accession | YP_776109 |
Protein GI | 115358971 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG1157] Flagellar biosynthesis/type III secretory pathway ATPase |
TIGRFAM ID | [TIGR01026] ATPase FliI/YscN family [TIGR02546] type III secretion apparatus H+-transporting two-sector ATPase |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.0682541 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACGGGC CGCTCGACGA TCCGCAGTCA TTCGGTGACG GCAGCGACGA CGATGCCGCG CCGTTCGATC GCGGCCGCCT CGTCGGCGAC CTCGATGCGG GGCTCGCGTT CTTCTCGCCG GTGTCGGTGC AGGGCCGCGT CAATCATGCG GTCGGACAGA TCCTCAACGC GACCGGGATC CGCGCGCGGC TCGGGGAGAT CTGCGAGCTG CGCACGCCGA ACCAGCCGAC GCTGCTCGCC GAAGTGGTCG GCTTCTCGCG GCAGACCACC TTGCTCACGC CGCTCGGCGA CGTGGCCGGC CTGTCGCCGG AGACGACCGT CGTGCCGTCG GGGCGCGAGC ATGTATTCCC GGTCGGCGAA GCGCTGTTCG GCCGCGTGCT CGACGGGCTC GGCCGGCCGC TCGACGATCG CGGGCCGGTG ACGGGCGCCG CGTGGGTCTC GACGCAGCAG GACCCGCCCA ATCCGCTCGC GCGCAAGATG ATCGACACGC CGTTTCCGAC CGGCGTGCGC GTAATCGACG GCCTGATGAC GCTCGGCATC GGCCAGCGCG TCGGCATCTT CGCGCCGTCG GGTGTCGGCA AGAGCACGCT GCTCGGGATG ATCGCGCGCG GCGCGCAGGC CGACGTGAAC GTGATCGCGC TGGTCGGCGA ACGCGGCCGC GAAGTGCGCG AGTTCATCGA GCACAGCCTG TCGCCCGAGG TGCGCGCGCG CTCGATCGTC GTCGTGTCGA CGTCCGATCG TCCGGCGATG GAACGCGTGA AATCCGCGCT GGTCGCGACC GCGATCGCCG AGCATTTCCG CGATGCGGGC AAGCGCGTGC TGCTCCTGGT CGACTCGCTC ACGCGCTTTG CCCGCGCGCA GCGCGAGGTC GGACTCGCGA GCGGTGAGCC GCCGACACGG CGCAGCTTTC CGCCGTCGAC ATTTGCCGTA CTGCCGCGCC TGCTCGAACG CGCGGGGCAG GGCGCGACGG GATCGATCAC CGCGCTGTAT ACGGTGCTCG TCGAAGGCGA TGAGGAATCC GATCCGATTG CCGAGGAAGT GCGCTCGATC CTCGACGGCC ATATCGTGCT GTCGCGCAAG ATCGCGCTCG CGAACCGCTA TCCGGCGATC GACGTGCTCG CGAGCCTGTC GCGCGTGATG CCGCTCGTCG CGAGCCGCGC ACATCAGCAG TCGGCCGCGC GCGTGCGCGA GCTGATCGCG AAGTATCAGG AAATCGAGCT GCTCGTGCAG ATCGGCGAGT ATCGCGAGGG CAGCGACCGG CTCGGCGATC TCGCGCTGCG CGCGCGCGAT GCGATCGGTG CGTTCTGCGC GCAGGGCTCG CACGAGGACG TGCGCTTCGA CGCGCTGCTC GCGAAGCTGA CGAAACTCGC GAACGACCAT GTCTGA
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Protein sequence | MNGPLDDPQS FGDGSDDDAA PFDRGRLVGD LDAGLAFFSP VSVQGRVNHA VGQILNATGI RARLGEICEL RTPNQPTLLA EVVGFSRQTT LLTPLGDVAG LSPETTVVPS GREHVFPVGE ALFGRVLDGL GRPLDDRGPV TGAAWVSTQQ DPPNPLARKM IDTPFPTGVR VIDGLMTLGI GQRVGIFAPS GVGKSTLLGM IARGAQADVN VIALVGERGR EVREFIEHSL SPEVRARSIV VVSTSDRPAM ERVKSALVAT AIAEHFRDAG KRVLLLVDSL TRFARAQREV GLASGEPPTR RSFPPSTFAV LPRLLERAGQ GATGSITALY TVLVEGDEES DPIAEEVRSI LDGHIVLSRK IALANRYPAI DVLASLSRVM PLVASRAHQQ SAARVRELIA KYQEIELLVQ IGEYREGSDR LGDLALRARD AIGAFCAQGS HEDVRFDALL AKLTKLANDH V
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