| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_4213 |
|---|
| Symbol | |
|---|
| ID | 4313108 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria AMMD |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008391 |
|---|
| Strand | + |
|---|
| Start bp | 1135718 |
|---|
| End bp | 1136116 |
|---|
| Gene Length | 399 bp |
|---|
| Protein Length | 132 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 638152054 |
|---|
| Product | response regulator receiver protein |
|---|
| Protein accession | YP_776100 |
|---|
| Protein GI | 115358962 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 32 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.866361 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGATTGCA AATACCTGTA CATCGACAAC ATAAAAATCA ACTTCGTGCG CCGCACGATC
GAAATCGACA ACAAAATCGT CGACGTCACC CCGCGCGAAT TCGATGTCGT CGAATTCCTG
CTCGACAATA TGAACAAGAT CGTGCCGCGG CAGGCGATCC AGGAGGCGGT CTGGGGCCGC
GAGCTCGGCG TGTCGTCGCG CACGCTCGAC ACCCATATCT CGCGCATCCG TTCGAAGCTG
CAGCTCGATC ACGACAAGAA CCTGCGGATC ATCCCGATCT ATGCGGTCGG CTATCGGCTG
GTGCTGTTCG GCGCGGCCAT GACGCACGTC GAGCGCCACG ACGCGGCGCC GATCCTGCGC
GCCGCGCCGC AGTCGGCGCT GGCCGCCGAC TACGCGTAA
|
|---|
| Protein sequence | MDCKYLYIDN IKINFVRRTI EIDNKIVDVT PREFDVVEFL LDNMNKIVPR QAIQEAVWGR
ELGVSSRTLD THISRIRSKL QLDHDKNLRI IPIYAVGYRL VLFGAAMTHV ERHDAAPILR
AAPQSALAAD YA
|
|---|
| |