Gene Bamb_4194 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_4194 
Symbol 
ID4313089 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008391 
Strand
Start bp1112724 
End bp1113119 
Gene Length396 bp 
Protein Length131 aa 
Translation table11 
GC content67% 
IMG OID638152035 
ProductPilT domain-containing protein 
Protein accessionYP_776081 
Protein GI115358943 
COG category[S] Function unknown 
COG ID[COG3744] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.82082 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATCGTGC TGGATACGCA TGCATTGGTG TGGTGGGTGG CGGGCGATCC GTCGCTCAGC 
AAGAAGGCCC GCGGCGCAAT CGATCGCGCG CGCGGCGAAG GCGCGCTCGC CGCGTCCGCG
ATCTCCGCAT GGGAAATCGC GATGCTGGTG CGCAACGAAC GCCTCGCGCT GACGATGGAC
GTCGATGCGT GGCTCGCGAC GGTCGCGCAA ATCGACGGCA TGCGCTTCGT GCCCGTCGAT
GCCGACATCG CCGCGAAGTC CACCGCCCTG CCCGGCACGT TCCATAAGGA TCCGGCCGAT
CGCATGATCG TCGCCACCGC CCGGCGGCTC GGCGCGCCGC TCGTCACCCG CGACGAAAAG
ATTCGTGCGT ATGCGCACGT GAAGACGCTT TGGTGA
 
Protein sequence
MIVLDTHALV WWVAGDPSLS KKARGAIDRA RGEGALAASA ISAWEIAMLV RNERLALTMD 
VDAWLATVAQ IDGMRFVPVD ADIAAKSTAL PGTFHKDPAD RMIVATARRL GAPLVTRDEK
IRAYAHVKTL W