| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_4190 |
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| Symbol | |
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| ID | 4313085 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008391 |
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| Strand | + |
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| Start bp | 1108706 |
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| End bp | 1110949 |
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| Gene Length | 2244 bp |
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| Protein Length | 747 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 638152031 |
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| Product | TonB-dependent siderophore receptor |
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| Protein accession | YP_776077 |
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| Protein GI | 115358939 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG4774] Outer membrane receptor for monomeric catechols |
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| TIGRFAM ID | [TIGR01783] TonB-dependent siderophore receptor |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.487534 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGTCCC GTCCTGACGA GCTGAAGCTC GGCAAATTCA CCACCCTGTG CAGCGTGCTC
GCCGCAAGCC CCGCGTTCGC CGACGGCACG CCGTCGCCCG CCCCGGTCAG CACCGAAGGC
CATCTCGCGC CGATCGAAAT CCAGGGCAAG ACCGAGCACA GCTACAAGGC CGACTTTTCC
GCCTCCGCGA AATTCACCGC GCCGCTCGTC GACACGCCGA AGTCGGTGAC CGTGATCCCG
CAGGAACTGA TCCAGAACAG CGGTGCGGCA ACGCTGACCG AAGCGCTGCG CACCGTGCCC
GGCATCACGT TCGGCGCGGG CGAAGGCGGC AACCCGCTCG GCGATCGTCC GTTCATCCGC
GGCTACGACT CGCAGGGCAG CATGTTCGTC GACGGGATGC GCGACACGGG CGCGACCACC
CGCGAGATCT TCAACACCGA GCGCGTCGAG ATCACCAAGG GTTCCGACGG CGCGTACGGC
GGCCGCGGCG GCGCGGGCGG CAGCATCAAC CTGATCACCA AGGCCCCGCA CCTCGGCACG
ACGGCCGCCG CGAGCGCGGG CTTCGGCACC GACCGCTATC GCCGCTTCAC GGCCGACGGC
AACTGGCAAT TCGCCGATCA CGCCGCGTTC CGCCTGAACC TGATGAGCCA CAACAACGAC
GTCGCCGGCC GCGACGTCGT CAACAACGAG CGCTGGGGCG TCGCGCCGTC GATCGCGTTC
GGTCTCGGCA CGCCGACGCG CGTGACCGCG AGCTACTACC ACCTGTCGAC CGACGACATG
CCCGACGGCG GCATTCCGTA CTTCTACACG ACGTCGAACA AGCCCGCGAA CGTCGACACG
ATTTATCCGG CGCCCGTCGA TCGCCACAAC TTCTATGGCC TGATCGACCG CGACTTCCGC
AAGACCACGT CCGACATCAG CACGATCCGG ATCGAGCACG ACATCACGCC GGGGCTGACG
GTGCGCAACA CCACGCGCTA TACGGAATCG ACGCAGGACT ACATCTGGAC GCAGCCCGAC
GACAGCCAGG GCAACGTGGT GAACGGCAAG GTCTGGCGCC GCAACAACAA CCGCGACAGC
TCGATCAACA GCCTCGCGAA CCTGACCGAA TTGTTCGGCG AATTCCGTAC CGGCCCGTTC
AAGCACAGTT TCACGACCGG CATCGAACTG TCGCGCGAAT GGGGCAAGCG CGACTCCTAC
AAGGTGGCGA CCGACACCGG CAAGATCTGC CAGAAGGGCA TCGGCGCCGC GTCGGGCTAC
AACTGCACGA GCCTGTGGTC GCCGAACCCG AGCGATCCGT GGGCCGGCTC GGTCACGCGC
AACAACGATT ACGCGCATGC GCGCACCACG ACGAAGTCGA TCTACGGCTT CGACACGATC
GAGATCACGC CACGCTGGCA GGTGAACGCC GGCGTGCGCG TCGACGACTA CTCGACCCGC
TTCACCGACA CCAAGGCCAA CGGCGGCAAG ACCTACACGC GCGACGACAC GCTCTTCAAC
TGGCAGGCCG GCCTCGTGTT CAAGCCCGCG CAAAACGGCA GCATCTATGC GTCGTATGCG
ACGTCGTCGA CGCCGGCCGG CATGCTGCTC GGCGAAGGCA GCGAAACGCA GTCGCTCACG
CCCGGCCGCG GCGGCGTCGG GCCGAACGCC GACCAGATGG CGCCCGAAAA GAACCGCAGC
ATCGAGCTCG GCACGAAGTG GAACGTGCTG AACGACCAGC TCGCGCTCAC CGCCGCGCTG
TTCCAGATCG ATACGACGAA TGCACGCGTG ACGCTGCCGA ACAACCAGTA CGCGATGGTC
GGCAACAAGC GCGTGCAGGG TCTCGAGCTT GGCGTCGCCG GCCAGATCAC GAAGCAATGG
CAGGTATTCG GCGGCTACAC GTACATGAAG AGCGAGCTGC GCGACAACGG CAAGGACGCC
GCGAACGACG GCCACCGCTT CCCGAACACG CCGAAGCACA GCCTGACGAT GTGGTCGAAC
TACGACGTGA CGCCGAAATT CACCGTCGGC GGCGGCGCGT TCTACATGTC GGAAGTGTTC
GGCGATCCGG CGAACCTGCG CGCGGTGCCG TCGTACTGGC GCTTCGACGC GATGGCGCAG
TACCGGATCA ACAAGAAGCT CGACCTGCAG TTGAACGTGA ACAACCTGTT CAACCGCACG
TACTTCGATC AGGCGTATCC GGCGCACTAC GCGTCGATCG CGCCGGGCCG CTCGGCGTTC
ATCACGCTGA ATGCGCGTTA CTGA
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| Protein sequence | MKSRPDELKL GKFTTLCSVL AASPAFADGT PSPAPVSTEG HLAPIEIQGK TEHSYKADFS
ASAKFTAPLV DTPKSVTVIP QELIQNSGAA TLTEALRTVP GITFGAGEGG NPLGDRPFIR
GYDSQGSMFV DGMRDTGATT REIFNTERVE ITKGSDGAYG GRGGAGGSIN LITKAPHLGT
TAAASAGFGT DRYRRFTADG NWQFADHAAF RLNLMSHNND VAGRDVVNNE RWGVAPSIAF
GLGTPTRVTA SYYHLSTDDM PDGGIPYFYT TSNKPANVDT IYPAPVDRHN FYGLIDRDFR
KTTSDISTIR IEHDITPGLT VRNTTRYTES TQDYIWTQPD DSQGNVVNGK VWRRNNNRDS
SINSLANLTE LFGEFRTGPF KHSFTTGIEL SREWGKRDSY KVATDTGKIC QKGIGAASGY
NCTSLWSPNP SDPWAGSVTR NNDYAHARTT TKSIYGFDTI EITPRWQVNA GVRVDDYSTR
FTDTKANGGK TYTRDDTLFN WQAGLVFKPA QNGSIYASYA TSSTPAGMLL GEGSETQSLT
PGRGGVGPNA DQMAPEKNRS IELGTKWNVL NDQLALTAAL FQIDTTNARV TLPNNQYAMV
GNKRVQGLEL GVAGQITKQW QVFGGYTYMK SELRDNGKDA ANDGHRFPNT PKHSLTMWSN
YDVTPKFTVG GGAFYMSEVF GDPANLRAVP SYWRFDAMAQ YRINKKLDLQ LNVNNLFNRT
YFDQAYPAHY ASIAPGRSAF ITLNARY
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