| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_4172 |
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| Symbol | |
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| ID | 4313067 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008391 |
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| Strand | + |
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| Start bp | 1091886 |
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| End bp | 1093205 |
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| Gene Length | 1320 bp |
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| Protein Length | 439 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 638152013 |
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| Product | major facilitator transporter |
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| Protein accession | YP_776059 |
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| Protein GI | 115358921 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG2223] Nitrate/nitrite transporter |
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| TIGRFAM ID | [TIGR00883] metabolite-proton symporter |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.756648 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCGACA CCATGAGCAC TCTCGCCCAG CCCGCCGCCC ACGCGCCCCG CCGTGTCCGC
AACAGCCGAC TCGCGTCCGC GAGCATGATC GGCACGTCGC TCGAGTGGTA CGACTTCACG
ATCTACAACA CGCTCGCCGC GCTCGTCTTC AATCATCTGT TCTTTCCGTC GGTCGATCCG
CTGGCCGGCA CGATCCTCGC GTTCTCGACC TATGCGGTGG GCTACGTGTC GCGCCCGCTC
GGCGGCTTCG TGTTCGGCAA CCTCGGCGAC CGCATCGGCC GCCGCGCGGT GCTGATGCTC
ACGCTTGTGC TGATGGGGAT CACGACCGCG CTGATGGGCG CGCTGCCGAC CTATGCGCAG
GCGGGCATCC TGAGCCCGAT CCTGCTCGTC GCGCTGCGCT TCGTGCAGGG CGTCGCGCTC
GGCGGCGAAT GGGCCGGCGC GGTGCTGCTG TCGGTCGAGC ACGGCGACCA GAAGCGGCGC
GGGCTGTCCG CGTCGTGGAC GCAAATGGGC CCGTCGTTCG GCACGCTGCT CGGCACCGGC
TGCATCGCGC TCGTGACGCT GTCGACCACG TCGGGAGACT TCCTGTCGTG GGGCTGGCGC
GTGCCGTTCG CGGCCAGCGC GCTGCTCGTC GTGTTCGGCT TCTGGCTGCG TCGCGGCGTC
GACGAAACGC CGCAGTTCGA GCAGCTCGCC GAGTCGCACG CGACCGCCGA AGTGCCCGTC
GCCGAAGTGC TGAAATGCCA CTGGCGACGC CTGCTGATCG CCGGCGGCTC GCGCATCGGC
TCCGACGTGC TGTATGCGCT GATCGTCGTG TTCACGCTGA CGTACGTGAC GACCGTGCTG
CACCTGTCGC GCCCCGTCGC GCTGACGGCG GTGATGGTCG GCACGGCCTG CAACGCGCTT
GCGGTGCCGT TCTTCGGCGC GCTGTCGGAC CGCTTCGGGC GCCGTCCGGT GTACCTCGCC
GGCGCGATCG CCGGCATCGT GTGGGCGTTC GTGTTCTTCA CGATGCTCGA CACCGCGCGG
CCGGGCGCGA TCGTCGCGGC CGTCGCGATC GGCCTCGTGA TCCACGCGGT GATGTACGGC
CCGCAAGGCG CGTTCGTCAC CGAGCAGTTC CCGACGCGCG TCCGTTATGC GGGCTCGTCA
CTGGCGTACA CGCTCGCCGG CATCGTCGGC GGCGGCTTCG CGCCGCTCGT GATCGCGACG
CTGTTCCGCC AGACGGGCAC GACCACGGCC GTGTCGCTGT ACGTGACCGC GGCGCTCGTC
GTGACGTCGA TCGCGCTGCT CGCCGCGCGC GAGACCGCGC ACCGTCCGCT CGCGGACTGA
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| Protein sequence | MPDTMSTLAQ PAAHAPRRVR NSRLASASMI GTSLEWYDFT IYNTLAALVF NHLFFPSVDP
LAGTILAFST YAVGYVSRPL GGFVFGNLGD RIGRRAVLML TLVLMGITTA LMGALPTYAQ
AGILSPILLV ALRFVQGVAL GGEWAGAVLL SVEHGDQKRR GLSASWTQMG PSFGTLLGTG
CIALVTLSTT SGDFLSWGWR VPFAASALLV VFGFWLRRGV DETPQFEQLA ESHATAEVPV
AEVLKCHWRR LLIAGGSRIG SDVLYALIVV FTLTYVTTVL HLSRPVALTA VMVGTACNAL
AVPFFGALSD RFGRRPVYLA GAIAGIVWAF VFFTMLDTAR PGAIVAAVAI GLVIHAVMYG
PQGAFVTEQF PTRVRYAGSS LAYTLAGIVG GGFAPLVIAT LFRQTGTTTA VSLYVTAALV
VTSIALLAAR ETAHRPLAD
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