| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_4170 |
|---|
| Symbol | |
|---|
| ID | 4313065 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria AMMD |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008391 |
|---|
| Strand | + |
|---|
| Start bp | 1089971 |
|---|
| End bp | 1091020 |
|---|
| Gene Length | 1050 bp |
|---|
| Protein Length | 349 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 638152011 |
|---|
| Product | LysR family transcriptional regulator |
|---|
| Protein accession | YP_776057 |
|---|
| Protein GI | 115358919 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACATCC GGTTTCTTGA AACCTTCGTC TGGCTCGCGA AGCTGGAGAA CTTCCGGCTC
ACGGCCGAGA AACTGCACAC GACGCAGGCG GCCGTGTCGA GCCGCATCGC GTCGCTCGAA
GAGGCGTTCG ACGTGCGGCT GTTCGACCGC AACACGCGCT CGGCCACGCT CACGCCCGCG
GGCCGGCGCA TGCTCGCGTA CGCGGAGCGG ATCGTGCGGC TCGACGGCGA GATGCGGCGC
GACATCGACG CGGCGAGCGA CGCGGGCCTG ATCCGGATCG GCGTGATCGA GTCGATCGTG
CACAGCTGGT TTCCGGCGCT GATGGCGCAA TTGCGCGAGC GTTATCCGCG CCTCGACGTC
GAGATCACGA GCGACACGAC GCTGCACCTG ATCCGCCTGC TCAGCACCGA CGGCGTCGAC
CTGATCCTGC AGACCGACCC GGTGCCCGGC CCCGACTTCA CGAACCTGCC GCTGTGCGAA
TTCCCGGTGC GCTGGGCGGC GAGCCCGCGT CTCGGGCTCG GCGGCGAACG GCTCGACGTC
GCGCGGCTTG CCGCGTACCC GATCATCAGC TTCTCGCGCC ACTCGGGGCC GCACGCGACG
ATCGAGCGGT TGTTCGCCGC CGTCGAGCGG CCGGCCAGCA TCAACTGCAT CACGTCGGTC
GCCGCGATGA TCCGGCTCGT CGCCGACGGT TTCGGCGTGG CCGCGCTGCC GCCCGCGATC
ATCGGGCGCG AACTGCAGGA AGGCGCGCTC GAACTGCTCG ACGTGGAACC CGAATTCCCC
GCGCTGCCGC TCGTCGCGTC GTATCGCACG CAGGGGCTGC CGGTCGCCGC GCGCATCGCG
GAACTGGCGA GCGAAGTCGC GCGCGCGATG CCGGCCGCCG CGAGCCATGC GAAGCCGGTC
GCATCGGCAA AGGTCGAGGC CGAGGCTGAC TCGGTCGGCA AAGCCACCGC TGCCCGCCCG
GCGACAAAAA CCGGCACCGC GGCGCCAAAA CGCACGCCGA AATCCGCGCC GCCCGCGGCT
GCGGCGAAAC GCCGTCCGCG CCGCTCATAA
|
|---|
| Protein sequence | MNIRFLETFV WLAKLENFRL TAEKLHTTQA AVSSRIASLE EAFDVRLFDR NTRSATLTPA
GRRMLAYAER IVRLDGEMRR DIDAASDAGL IRIGVIESIV HSWFPALMAQ LRERYPRLDV
EITSDTTLHL IRLLSTDGVD LILQTDPVPG PDFTNLPLCE FPVRWAASPR LGLGGERLDV
ARLAAYPIIS FSRHSGPHAT IERLFAAVER PASINCITSV AAMIRLVADG FGVAALPPAI
IGRELQEGAL ELLDVEPEFP ALPLVASYRT QGLPVAARIA ELASEVARAM PAAASHAKPV
ASAKVEAEAD SVGKATAARP ATKTGTAAPK RTPKSAPPAA AAKRRPRRS
|
|---|
| |