Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bamb_4162 |
Symbol | |
ID | 4313057 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria AMMD |
Kingdom | Bacteria |
Replicon accession | NC_008391 |
Strand | - |
Start bp | 1080942 |
End bp | 1082444 |
Gene Length | 1503 bp |
Protein Length | 500 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 638152003 |
Product | amino acid permease-associated region |
Protein accession | YP_776049 |
Protein GI | 115358911 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0531] Amino acid transporters |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.966406 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCGGGAT GGTCTGGAGT GACGGGCGCC GCGGGCGATA CGCCCGCCGG TGCGCCGGCT GAAGCGGGCG GCGGCACGGT GCTGACGGCG GGCGCGGTCG GTTTTCCGAC CGCGCTGGCG AGCGCCGTCG GCCTCATCAT GGCGAGCCCG GTGATCCTCA CCGCGACGTC GGGCTTCGGG ATGGGCGGCT GGGCGTTCGC GGTCGCGATG ATCATCGCGT TCGTGATGAT GCAGGCGCAG GCGACGACGT TCTCGGAGGC CGCCGCGATG CTGCCGACGG CCGGCTCGGT TTACGATTAC CTGTCGTGCG GGCTCGGCCG CTTCTGGGCG ATCACCGGCA CGATTTCCGC GTATTTCCTC GTCCACGTGT TCGCCGGCAC GGCGGAGACG ATCCTGAGCG GCATCATGGC GCTCGTGAAC TTCGAGTCGC TGAACGCCGC GCTCGAGAAG CACAACAGTT CATGGCTCGT CGGCGTCGGC CTGGTGGTCA CGTTCGCGAT CACCAACATC ATCGGCATCA AGGTGTTCAG CAAGCTCGAG ATCGTGCTGA CGGCCGGCAT GTGGCTGTCG CTGATGATCT TCGGGATCCT CGGCCTCGTC GCGGCGCCCG CCGTGCATCT CGACGGCTGG TTCGGCGGCT CGGACGTCGG CACGTCGGTG CCGGCCGTGC TGTCGCTGGT CGGGATGGCG ATGTTCATGT TCGTCGGCTG CGAGTTCGTC ACGCCGCTCG CGCCGGAAAT GAAGGCGCCG GGCCGCACGA TTCCGCGTGC GATGGCGCTC GGCCTCGTCG GCGTCGCGAT CTGTATGTTC CTGTACGGCG CGGCGATCCG CCGCCAGGTC GCGAACGTGC CGGTCAGCCC CGACGGCCTG ACGCACCTGC TCGACACGCC GGGCGCGATC CCCGCGTTCG CGCTGCAGGT GCTTGGGCCG TTCGGCCGCG TGTGGTTCGG CATCGCGTTC CTGTGCGCGG GCGCCGCGAC GATCAACACG CTGATGGCCG GGCTGCCGCG CATCCTGTAC GGGATGGCGA TCGACGGCGC GCTGCCGCGC TGCTTCGCAT ATCTGCATCC GCGCTTCAAG ACGCCGGTGG TCGGCATCGT CGCGGCGGCG ATCGTGCCGA TCGCCCACGC ATGGCTGATC CACGGCAACC TCGACAGCAT CCTTCACCTC GTGCTCGCCG CGACCTGCGC ATGGGGCACC GCGTACCTGC TCGTCACCGC GTCGGTCGTG ATGCTGCGCA TCCGCCGTCC CGACCTGCCG CGCCCGTACC GTTCGCCGCT GTTCCCGCTG CCGCAGATCG TGTCGAGCGT CGGCATCGTG CTCGCGATCT GGTACATCAC GCCGCCCGGC ATGAACGCGC GCGACATCTA CGTGCCGTTC GGCGCGATGC TCGGGCTCAC CGCGCTGTAT GCGCTGTTCT GGACGGTCGT CGTGCAGCGC CGGCATCCGT TCAAGCCGGT GCCGGTCGAG GAAGTGCTGC GCCGCGAGCA CGTCGCGTCG TGA
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Protein sequence | MSGWSGVTGA AGDTPAGAPA EAGGGTVLTA GAVGFPTALA SAVGLIMASP VILTATSGFG MGGWAFAVAM IIAFVMMQAQ ATTFSEAAAM LPTAGSVYDY LSCGLGRFWA ITGTISAYFL VHVFAGTAET ILSGIMALVN FESLNAALEK HNSSWLVGVG LVVTFAITNI IGIKVFSKLE IVLTAGMWLS LMIFGILGLV AAPAVHLDGW FGGSDVGTSV PAVLSLVGMA MFMFVGCEFV TPLAPEMKAP GRTIPRAMAL GLVGVAICMF LYGAAIRRQV ANVPVSPDGL THLLDTPGAI PAFALQVLGP FGRVWFGIAF LCAGAATINT LMAGLPRILY GMAIDGALPR CFAYLHPRFK TPVVGIVAAA IVPIAHAWLI HGNLDSILHL VLAATCAWGT AYLLVTASVV MLRIRRPDLP RPYRSPLFPL PQIVSSVGIV LAIWYITPPG MNARDIYVPF GAMLGLTALY ALFWTVVVQR RHPFKPVPVE EVLRREHVAS
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