| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_4144 |
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| Symbol | |
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| ID | 4313039 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008391 |
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| Strand | - |
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| Start bp | 1064118 |
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| End bp | 1064822 |
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| Gene Length | 705 bp |
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| Protein Length | 234 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 638151985 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_776031 |
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| Protein GI | 115358893 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.312324 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTGTAG AGAAAGTGGC TTTGGTGACG GCGGCGGGCA AGGGCATGGG CGCCGCAATC
GCGCGCGACC TCGCGAACGA CGGCTATCGC GTCGCGCTGA TGTCGCCGTC CGGCAGCGCG
GTCGAGCTGG CGCAGGAGCT GGGTGGTTTC GGCGTTGCAG GCTCCGTTAC CGACGACGCC
GACATCGAGC GTTTCGTGAA CGAGACGCTC GCGAAGTACG GCCGTATCGA CGCGGTCGTC
AACAACACCG GACATCCGCC GAAGGGCGAC TTGCTCGCCA TCGAGGACGA CAAGTGGCAC
GAAGGGCTCG ACCTGATCGT GCTCAACGTC GTTCGCGTGC TGCGCCGCGT GACGCCCGTC
TTCCTGAAGC AGGGCGGCGG CGCGGTGGTC AATATTTCGA GCTTCGCGGC CGACGCGCCC
GAGCAGGCGA TGCCGGTGTC GTCCGCGCTG CGCGCGGCGC TGAGTTCGGT CACGCGCCTG
TACGCCGACC GGTATGCGAA GGACAACATT CGCATCAATT CGGTGCTGCC GGGCTTCATC
GACAGCTGGC CGGAGACGCC CGAGATCGTT GCCCGCATTC CGGTCGGCCG TTTCGGCAAG
ACGCAGGAGA TCGCGCAGAC CGTGAGGTTC CTGCTGTCGG ACGGCGCCGG CTACATCACC
GGGCAGAACA TTCGGGTCGA CGGTGGCATC GTGCGCGCGC TGTAA
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| Protein sequence | MTVEKVALVT AAGKGMGAAI ARDLANDGYR VALMSPSGSA VELAQELGGF GVAGSVTDDA
DIERFVNETL AKYGRIDAVV NNTGHPPKGD LLAIEDDKWH EGLDLIVLNV VRVLRRVTPV
FLKQGGGAVV NISSFAADAP EQAMPVSSAL RAALSSVTRL YADRYAKDNI RINSVLPGFI
DSWPETPEIV ARIPVGRFGK TQEIAQTVRF LLSDGAGYIT GQNIRVDGGI VRAL
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