| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_4131 |
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| Symbol | |
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| ID | 4313026 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008391 |
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| Strand | - |
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| Start bp | 1049081 |
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| End bp | 1049842 |
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| Gene Length | 762 bp |
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| Protein Length | 253 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 638151972 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_776018 |
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| Protein GI | 115358880 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.0599509 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAGGCA GCGAACGGCA ACGTACCGCG ATCGTCACGG GCGGGTCGAG CGGAATCGGC
TTCGCGATCG CGCGCCGGCT GGTGGAGGAC GGGTATCGCG TCGCGATCGT CGGGCGCGAC
GCGGGGCGGC TGGAAGCGGC CGTCGCCCGA CTCGGCAACG CGGCGATCGG GCAGGCGGCC
GACTTGAGCG TGCGGCGCGA CGCGGCGTCG GCGGTCGCGG CGATCGTCGC GCGGTGGCCG
CGCATCGACG CGCTGGTCAA CAACGCGGGG CAGACGGGGC GGGTGGGCGC GGACACCGAA
GCGGGCGACG CCGAAACCGT ATGGGATGCC GTCCTCGCCG CGAATCTCAA AAGCACGTTC
ATCACGACGC TGGCCGTGCT GCCGCACCTG GCCGAGCGCG CGGCGCGGAT CGTGAACATC
GGGTCGATCG CGGCGCGCGC CGGCAGCCTG CTACCGGGCG GCCTCGCGTA TGCGGCGGCG
AAGGCGGGGG TCGAAGGGTT CACCGCAGCG CTGGCGCGCG AGCTCGGGCC GCGCGGCGTC
ACGGTCAATA CGGTCGCGCC CGGCTATATC GCCGATACGC GCTTGTTCGG CGATGCCGGC
GTCGCACCGG CTATCGCGAC GACGATCCGC GAGCAGACGC CGGTCGGCCG CGCCGGCCAT
CCGGAAGACA TCGCGGACGC GGTCGCGTGG CTCGCCGGGC CGCGCGCGTC GTTCGTCACC
GGCGCGACGA TCGCGGTGAA CGGCGGCTGG CGCGTCGGGT GA
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| Protein sequence | MTGSERQRTA IVTGGSSGIG FAIARRLVED GYRVAIVGRD AGRLEAAVAR LGNAAIGQAA
DLSVRRDAAS AVAAIVARWP RIDALVNNAG QTGRVGADTE AGDAETVWDA VLAANLKSTF
ITTLAVLPHL AERAARIVNI GSIAARAGSL LPGGLAYAAA KAGVEGFTAA LARELGPRGV
TVNTVAPGYI ADTRLFGDAG VAPAIATTIR EQTPVGRAGH PEDIADAVAW LAGPRASFVT
GATIAVNGGW RVG
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