| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_4114 |
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| Symbol | |
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| ID | 4313009 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008391 |
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| Strand | + |
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| Start bp | 1036147 |
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| End bp | 1037706 |
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| Gene Length | 1560 bp |
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| Protein Length | 519 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 638151955 |
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| Product | outer membrane efflux protein |
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| Protein accession | YP_776001 |
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| Protein GI | 115358863 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.865486 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.0282956 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCGTCC CTGAACCGCC GGCCGCGTCG ATCGCCGCCG CCGCGCTCGC GACTGCCGTC
GCGCTGGCCG GTTGCGCAAC GTCGTCGATC GATCTGGCGC CGGACGCACC CGATCGCCCG
TGGCAGCCGC AAACGTCGGC CGCGGGCGAC ATCGTGCCGG CCCCGCCGCT CGCGTCCGCG
CAACGCGCAC CGCACGACTA CACGCTGCCG GCCTCGCCCG CGCTCGCATC GGTGTCGCCG
CCCGCCGCGC TCGATACCGC GCATCCGTAT ACGCTGCCCG AGCTGATCGA TCTCGCCGAA
TCGACGAACC CGCTGACCCG CATCGCGTGG AACGACGCGC GCAACGCGGC GCTCGCGGTC
GGCATCGCGA AGGCCGCGTA CCTGCCGAAT TTGTCCGCGA CCGCGATGGG CGCGTACCAG
ACGAGCCACG GCTCGACATC CACGATCCTC GGCGACGCGT CGAGCAACAC GACCGCGCAC
GGCACGATCT CGGCGCTGTC GCTGCAATGG CTGCTGTTCG ATTTCGGCGG CCGTACGGCG
CGCGTCGAGG CGGCCGAGCA GGCGTCGGTC GCGTCGAACG TCGCGTTCAC GGCCGTGCAT
CAGCAGGTGA TCCACGACGT GACGGTCGCG TACTACCGCT ACGAAGCCGC CCGCTCGCGC
GCGGCCAGCG CGCAGCAAGG CCTGACGAAC GCCGATGCGA TCCTCGCGGC GTCCCGCGCA
CGGCTCAAGC AAGGCGTCGG CACCGTCGTC GAACTCGCGC AGTCGACGCA GAACCGCGCA
CAGGCGAATC TCGCGCTGGT GCAGGCGAAC GGCGCGCAAA GCGACAGCTA TCTCACACTG
GTTTCCGCGC TCGGCATCTC GCCGCTGTCG AAGCCGTCGA TCGCCGCGCT GCCGAAGCGG
CCGCTGCCGC CCGCGCTCGC TTCGTCGGTC GACGCGATCG TGTCGGATGC GATCGCGCGC
CGTCCCGACC TGCAGGGCGC GTATGCGCTG GAGCAGGCCA ACCGCGCGAA GATCAAGGCC
GCGGAAGCCG CGTTCATGCC GAAGGTCTTC CTGTCCGCGT CGACGTCCTA TGCCAGCGGC
GGCACGGCCA TCACCGCGCT GCCCGCGATC GGCGACCAGG CGCCGACCGT CAACCTGAAC
GGCAGCCGCT ACGGCGGCGG CGTGTTCCTC GGCGTGACGA TCCCGCTGTA CGACGGCGGC
CTGCGCTCGG CGGTGCTGAT GCAGGCGCGC AACGATGCGC AGAGCGCGTC CGCGCGCCTC
ACGCGGACCA AGGAGGAAGC CGTCCGCCAG GTCGTCGCCG CGCAGAATGC GGTGCAGACG
AGCCTCGCAT CGCACGATGC GGCAAAGGCG CTCGTCGACG CCGCGCAGAC GAGCTACGAC
GCGGCGCTGA CCGCGTACCG GAACGGCGTG GGCTCGGTCA CCGATGCGAC GATCGCGCAA
AGCCAGCTGC TCGCGGCCCG CAACGCGGAG GTCGACAGCT ACGCCGGCGC GCTGTCGGCC
GCCGCCGCGC TCGCGCTCGC GACGGGGACG ATCGGGTCGT CGCAGGCACC GTCGCAGTAA
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| Protein sequence | MRVPEPPAAS IAAAALATAV ALAGCATSSI DLAPDAPDRP WQPQTSAAGD IVPAPPLASA
QRAPHDYTLP ASPALASVSP PAALDTAHPY TLPELIDLAE STNPLTRIAW NDARNAALAV
GIAKAAYLPN LSATAMGAYQ TSHGSTSTIL GDASSNTTAH GTISALSLQW LLFDFGGRTA
RVEAAEQASV ASNVAFTAVH QQVIHDVTVA YYRYEAARSR AASAQQGLTN ADAILAASRA
RLKQGVGTVV ELAQSTQNRA QANLALVQAN GAQSDSYLTL VSALGISPLS KPSIAALPKR
PLPPALASSV DAIVSDAIAR RPDLQGAYAL EQANRAKIKA AEAAFMPKVF LSASTSYASG
GTAITALPAI GDQAPTVNLN GSRYGGGVFL GVTIPLYDGG LRSAVLMQAR NDAQSASARL
TRTKEEAVRQ VVAAQNAVQT SLASHDAAKA LVDAAQTSYD AALTAYRNGV GSVTDATIAQ
SQLLAARNAE VDSYAGALSA AAALALATGT IGSSQAPSQ
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