| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_4112 |
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| Symbol | |
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| ID | 4313007 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008391 |
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| Strand | + |
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| Start bp | 1033091 |
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| End bp | 1034140 |
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| Gene Length | 1050 bp |
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| Protein Length | 349 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 638151953 |
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| Product | multidrug resistance protein MdtN |
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| Protein accession | YP_775999 |
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| Protein GI | 115358861 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1566] Multidrug resistance efflux pump |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.718729 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.0575764 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGGCCG CCGGCATCAC CCGCCCGTCC ACGAAAGGCC GCGTGATCGC GCTGGCGATC
GTCGCGCTCG GCATCGCCGC GCTCGCGTAC GCGTACCACC GCACATCGGC CTACCCGTCC
ACCGACGACG CGTCGATCGA CGCGGACCTC GTCCACGTCG CGTCGCCCGT CGGCGGCCGC
ATCGTGCGGC TCGCCGTGCA CGAGAACCAG CGTGTCGCGA AAGGCGACCT GCTGTATGAA
ATCGATCCGG TGCCGTACCG GCTGACGGTC GCGCAGGCGC AGGCCGATGT CGAGCTCGCG
CGCGCATCGC TCGACACGCG CCGCCGGTCG CTGATCGGCG AGCATTCGAA CGCGGCGGTC
GCCGTCGAGC AGGTCAAGCG CGCGACGCAG AATTACGATC TCGCGACGCG CGACGTGAAC
CGCCTCGCGC CGCTCGCCGC ACAGGGCTAC GTGAGCGCGC AGCAGTTCGA CCAGGCGAAG
GTGCGGCAGC GCGATGCGGC CGTGTCGCTC GCGCAGGCCA AGGAACAGCA GCGATCGTCC
GCGCAGACGA TCGGCGACGA TGCCGACGCG ATCGCGACGC TCCATGCGCG CGAAGCCGCA
CTCGCCCGCG CGCAGCACGC GCTCGACGAT ACGGTCGTGC GCGCGCCGCA CGACGGGCTC
GTGACGGGGC TGACCGTGCT CGCCGGCGAA ACCCTCGCGC CGAACCAGTC GATCTTCACG
CTGATCGACG CAAGCGAATG GTTCGCGGTC GGCAATTTCC GCGAGACGTC GCTGAATCGT
ATCGCGGTCG GCGATTGCGC GACCGTCTAT TCGATGATCG ACCGCAGCCG CGCGCTGACG
GGCAAGGTCA TCGGCATCGG CGCCGGCATC GCGGACAGCG ATCGCATCAA CCTGCCGCGC
GCGCTGCCGA TCGTGCAGCG GTCGGTGAAC TGGGTGCATG TCGCGCAGCG CTTCCCCGTG
CGCGTGAAGC TCGACGAACC CGACGGCAAG CTCGTGCGTG TCGGCGCGAG CGCGATCGTC
GAGGTCCGGC ATGGCTCAGC CTGCCGCTGA
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| Protein sequence | MKAAGITRPS TKGRVIALAI VALGIAALAY AYHRTSAYPS TDDASIDADL VHVASPVGGR
IVRLAVHENQ RVAKGDLLYE IDPVPYRLTV AQAQADVELA RASLDTRRRS LIGEHSNAAV
AVEQVKRATQ NYDLATRDVN RLAPLAAQGY VSAQQFDQAK VRQRDAAVSL AQAKEQQRSS
AQTIGDDADA IATLHAREAA LARAQHALDD TVVRAPHDGL VTGLTVLAGE TLAPNQSIFT
LIDASEWFAV GNFRETSLNR IAVGDCATVY SMIDRSRALT GKVIGIGAGI ADSDRINLPR
ALPIVQRSVN WVHVAQRFPV RVKLDEPDGK LVRVGASAIV EVRHGSACR
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