Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bamb_4097 |
Symbol | |
ID | 4312992 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria AMMD |
Kingdom | Bacteria |
Replicon accession | NC_008391 |
Strand | - |
Start bp | 1019568 |
End bp | 1021235 |
Gene Length | 1668 bp |
Protein Length | 555 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 638151938 |
Product | hypothetical protein |
Protein accession | YP_775984 |
Protein GI | 115358846 |
COG category | [E] Amino acid transport and metabolism [H] Coenzyme transport and metabolism |
COG ID | [COG0028] Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.357485 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.57528 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCTAAAA AAACCACGGT TGGCGAGCTG ATTGCCGCCT TTCTCGAGCA GTGCGACGTC AAAACCGCAT TCGGTGTCAT CTCGATCCAC AACATGCCGA TCCTCGACGC GATCAACTCG CGCGGCAACA TCCGGTATGT CGGCGCGCGC GGTGAAGCGG GCGCGGTGAA CATGGCCGAC GGCCTGGCCC GCGTGTCGGG CGGCCTCGGC GTCGCGTTCA CGAGCACCGG CACCGCGGCG GGCAACGCGG CGGGCGCGAT GGTCGAGGCG CTGACGGCAG GCACCGCGCT GCTGCACATC ACGGGGCAGA TCGAGACGCC GTACCTCGAC CAGGATCTGG CCTACATCCA CGAAGCGCCG GACCAGCTCA CGATGCTCGA CGCGATCTCG AAGGCCGCGT TCCGCGTGCG CACCGTCGAA ACCGTGCTGC CGACGATCCG CGAAGCGGTG CGTATCGCGC AGACCGCGCC GACGGGCCCC GTGTCGGTCG AGATTCCGAT CGACATCCAG GCCGCCGAAA TCGAATGGCC GGAAGACCTC GCGCCGGCGC ACGTCGCGGT GCGCGAGCAC GACGACGCAC GCGTCGCGAA GCTCGCCGAC GCGCTGGCGG CCAAGCGCCG TCCGCTGCTG TGGCTCGGCG GCGGTGCGCG CCATGCGCGG GCGGAAGTCG AACGTCTGGT GAAGCTCGGC TTCGGCGTCG TGACGAGCGT GCAGGGCCGC GGCGTGCTGC CGGAAGATCA CCCGGCGACG CTCGGCGCGT TCAACGTGCA TGCGTGCGTC GAGGCGTTCT ACAAGACCTG CGACGCGCTC GTCGTGGTCG GCTCGCGCCT GCGCGGCAAC GAGACGCTGA AATACAAGCT CGCGCTGCCG CAGCCGCTGT TCCGCGTCGA CGCCGATGCG CTCGCCGACA ACCGCGGCTA TCGCAACGAG CTGTTCGTGC ACGGCGATTC GAAGCGCGTG CTGGCCGAAT TGGCCGATCG CCTCGAGGGT CGCCTGTCCG TCGATCCGCA GTTCGCGCTC GATCTCGCGG CGGCGCGCGA GCAGGCCGTC GCCAGCGTCG CGGAAGGCCT TGGGCCCTAC AAGAAGCTCG TCGATACGCT GCAAGCGGCG GTCGGCCGCG ACTACAACTG GGTGCGCGAC GTGACGATCT CGAACAGCAC GTGGGGCAAC CGCCTGCTGA AGATCTTCGA GCCGCGCGCG GGCGTGCATG CGCTGGGCGG CGGCATCGGC CAGGGCATCC AGATGGGCAT CGGCGCGGCG CTGGCCGGCT CGGCCGCGAA GACGGTCTGC CTGGTCGGCG ACGGCGGCCT GATGGTCAAC GTCGGCGAGC TCGTGACGGC CGTGCAGGAA AACGCGAACG TGATGATCGT GCTGATGAAC GACCAGTGCT ACGGCGTGAT CCGCAACATC CAGGATGCGC AGTACGGCGG CCGCCGCTGC TTCGTGCAGC TGCACCAGCC CGATTTCGCG CAGTTCTGCG CGAGCTTCGG CCTCACGCAC TACCGGATCA CGTCGCTCGA CCAGGCCGAA GCGATCGTGC GCGAAGGGAT CGCGAAGGAA GGGCCGGTGA TGGTCGAGGT CGACATGCTG TCGGTCGGCG CGTTCGCATC GAACTTCGCG GGCCCGCCGG TGAAGACGGA AGAGCCGTCG GAGCGGCAAT ATGCGTAA
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Protein sequence | MSKKTTVGEL IAAFLEQCDV KTAFGVISIH NMPILDAINS RGNIRYVGAR GEAGAVNMAD GLARVSGGLG VAFTSTGTAA GNAAGAMVEA LTAGTALLHI TGQIETPYLD QDLAYIHEAP DQLTMLDAIS KAAFRVRTVE TVLPTIREAV RIAQTAPTGP VSVEIPIDIQ AAEIEWPEDL APAHVAVREH DDARVAKLAD ALAAKRRPLL WLGGGARHAR AEVERLVKLG FGVVTSVQGR GVLPEDHPAT LGAFNVHACV EAFYKTCDAL VVVGSRLRGN ETLKYKLALP QPLFRVDADA LADNRGYRNE LFVHGDSKRV LAELADRLEG RLSVDPQFAL DLAAAREQAV ASVAEGLGPY KKLVDTLQAA VGRDYNWVRD VTISNSTWGN RLLKIFEPRA GVHALGGGIG QGIQMGIGAA LAGSAAKTVC LVGDGGLMVN VGELVTAVQE NANVMIVLMN DQCYGVIRNI QDAQYGGRRC FVQLHQPDFA QFCASFGLTH YRITSLDQAE AIVREGIAKE GPVMVEVDML SVGAFASNFA GPPVKTEEPS ERQYA
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