Gene Bamb_4090 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_4090 
Symbol 
ID4312985 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008391 
Strand
Start bp1011229 
End bp1012896 
Gene Length1668 bp 
Protein Length555 aa 
Translation table11 
GC content69% 
IMG OID638151931 
Producthydroxylamine reductase 
Protein accessionYP_775977 
Protein GI115358839 
COG category[C] Energy production and conversion 
COG ID[COG1151] 6Fe-6S prismane cluster-containing protein 
TIGRFAM ID[TIGR01703] hydroxylamine reductase 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTTTTGCT ATCAATGCGA ACAGACCGAC CGGACCGGCG CGCGGCCCGG CTGTGCATCG 
GCGAAAGGCA ATTGCGGCAA GGATTCGACG ACGGCCGACC TGCAGGACCT GCTGGTTCAT
GCGGTGAAGG GCATTGCGCA GTACGGCGCG ATCGCGCGCA CGATGGGCGT GCCCGATCGC
GAAGCCGAGC GCTTCGTGCT GTACGCGATG TTCACCACGC TGACCAACGT GAACTTCCAT
GCGGCGCGCT TCGTCGCGCT GCTGCGTGAA GCCGCGCAGA CGCGCGATCG CGTGAAGGCC
GCCTGCGAAG CGCACGCACG CGCCGCCGGC ACGGCGGTGC CGGTGCTGCA CGGGCCGGCC
GAGTGGCAGC CGGCGGACGA TCTGGCGGGC TTGCTGAAGC AGGCGGCGAG CGTCGGCATC
GACGCGGGCC TCGACACGGT GGGCGCGGAT ATCGTCGGGC TGCGCGCGCT GGTGCTGTAC
GGCCTGAAGG GCGTGTGCGC GTATGCGCAT CATGCGCAGG TGCTCGGCTA CGAGCGCGAC
GACATCTACG AAGGCGTCGA CGCGGCGCTC GCATTCCTCG CGGGCAATCC CGCCGACGTC
GACGCACTGC TCGCGCATGC GCTCGATCTC GGCCGGCTGA ACCTGACGGT GATGGAACTG
CTCGACAACG CGAACACCGG CCGCTTCGGC GTGCAACAGC CGAGCGCCGT GCGCGTGTCG
CCGGTGGCGG GCAAGGCGAT CCTCGTGTCG GGCCACGATC TGGGCGATCT GCACGCGCTG
CTCGAACAGA CGGCGGGCAC CGGCATCCAG GTCTACACGC ATGGCGAAAT GCTGCCGGCT
CACGCGTATC CGTCGCTGAA GGCTTTCCCG CATCTGGCCG GCAACTACGG CGGCGCATGG
CAGGACCAGC AGAGCGACTT CGCGCGTTTC CCCGGGCCGA TCCTGATGAC GTCCAACTGC
ATCATCGAGC CGCTGCCGCA ATACCGGCAG CGCATCTTCA CGACGGGGCC GGTCGGCTGG
CCGGGCGTGC GCCATCTCGA ACATCACGAT TTCCCGACGC TGATCCGTGC CGCCCAGGCG
CTGCCGGGCT TCCAGGCCAC GGCGCCGGAG CAGACCATCA CCGTCGGGTT CGGCCGGCAT
GCGGTGCTGG GCGTCGCCGA CAAGGTGATC GACGCGGTGA AGGCCGGGCA GATCCGCCAC
TTCTTCCTGA TCGGCGGCTG CGACGGCGCG GCGCCGGGGC GTAATTACTA CACCGAGTTC
GCGGAACAGG CGCCCGACGA TACGGTCGTG ATGACGCTCG GCTGCAACAA GTACCGGTTC
AACCGGCACG CGTTCGGCGA TATCGGCGGC ATCCCGCGCC TGCTCGACAT CGGGCAGTGC
AATGACAGCT ATTCGGCGAT CCGGATCGCG ACCGCGCTCG CCGATGCGTT CGAATGCGGC
GTGAACGACC TGCCGCTGTC GCTCGTCATC TCGTGGTTCG AACAGAAGGC AGCGGCCGTG
CTGCTGACGC TGCTCGCGCT CGGCATCCGC AACATCCGGC TCGGGCCGAC GCTGCCCGCG
TTCGTCACGC CGGGCGTGCT CGCGGTGCTG GTCGATCAGT TCGGAATCCA GCCGATCGGC
GACGCCGGCG CGGACCTCGC CGCGGCGCTC GCGCGCCGGG CGGCATGA
 
Protein sequence
MFCYQCEQTD RTGARPGCAS AKGNCGKDST TADLQDLLVH AVKGIAQYGA IARTMGVPDR 
EAERFVLYAM FTTLTNVNFH AARFVALLRE AAQTRDRVKA ACEAHARAAG TAVPVLHGPA
EWQPADDLAG LLKQAASVGI DAGLDTVGAD IVGLRALVLY GLKGVCAYAH HAQVLGYERD
DIYEGVDAAL AFLAGNPADV DALLAHALDL GRLNLTVMEL LDNANTGRFG VQQPSAVRVS
PVAGKAILVS GHDLGDLHAL LEQTAGTGIQ VYTHGEMLPA HAYPSLKAFP HLAGNYGGAW
QDQQSDFARF PGPILMTSNC IIEPLPQYRQ RIFTTGPVGW PGVRHLEHHD FPTLIRAAQA
LPGFQATAPE QTITVGFGRH AVLGVADKVI DAVKAGQIRH FFLIGGCDGA APGRNYYTEF
AEQAPDDTVV MTLGCNKYRF NRHAFGDIGG IPRLLDIGQC NDSYSAIRIA TALADAFECG
VNDLPLSLVI SWFEQKAAAV LLTLLALGIR NIRLGPTLPA FVTPGVLAVL VDQFGIQPIG
DAGADLAAAL ARRAA