Gene Bamb_4087 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_4087 
Symbol 
ID4312982 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008391 
Strand
Start bp1008374 
End bp1009636 
Gene Length1263 bp 
Protein Length420 aa 
Translation table11 
GC content67% 
IMG OID638151928 
Producthypothetical protein 
Protein accessionYP_775974 
Protein GI115358836 
COG category[S] Function unknown 
COG ID[COG4320] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGCGGA TGGAAGGAGG ACGCATCGTG GCCAAGAAAA CCACCGGATC GGCCAAGCTG 
CCGGCCTGCG ACCAGCGCGC GCCCATTCTC GCCAATTTGC GCAGCCGCAA GATGGCGCGC
TCGATCCACA CCTATACGCG CGGCAGCGCC GAGCACTTTT ACGCATGGCT GGCGGACCAT
CGATCCGGCA CCGTGCCCGA CGGTCCCGCG ATATGGATCG GCGGCGATTG CCATCTCGGC
AATCTGGGGC CCGTCGCGTC GAAGACGGGT GAAGTCGCCG TGCAGATTCG CGATCTCGAC
CAGAGCGTGA TCGGCAATCC GGTCCACGAT GTGCTGCGTC TGGGGTTCTC GCTCGCCACC
GCGGCGCGCA GCTCCGATCT GCCCGGCATC ATCACGTGGC GGATGATCGA GGCGCTCGCC
GACGGATACG AGCAGGCGTT CGACAGCCGG CGCCGCGACG AACTCAGCCA CATGCAACGC
CCTCACGAGG TGCAGATCGC GATGAAGGCG GCGCTGCATC GCTCGTGGCG CAAACTCGAC
CGGCAGACGA TCATGAACAC CGCGCCGCAC ATCCCGTTGG GCAAACGCTT CTGGCCGCTG
TCGGAACGGG AGCGCAGCGC CATCCTCACG CTGTTCGAAA CCGCGCCGGT TTCGACGATC
GGCGCAGCGC TCAGCCGCAC GGCACATTGC GACGCCGGCA TGAAGGTCCT CGACGCCGCG
TTCTGGGTGA AGGGCTGCAG CTCGCTGGGC CGACGCCGTT ACGCGGTGAT GCTCGATATC
GACGACGCCT GTTCCGACGG ACATCCGCCC TACCTGATCG ACATCAAGGA AGCCAGGGCC
GCCAAGGCGC CCAAATACCC CGGCGTGCGC ATGCCGGGCG ATGCCGCACA ACGCGTGCTC
GAAGGCGCGC GGCACGTGTC GCCGATGCTG GGCAGCCGGA TGTGCGCGGC GCGCCTCGAC
GGGCGCGCCG TCGTGATGCG CGAATTGATG CCGCAGGATC TGAAACTGGA AGCGGAACGG
CTGTCGGAGG CCGACGCGGT GAAAGTCGCC CGCTACCTCG CGCTGGTCAT CGGCCGCGCG
CATGCCGCGC AGATGGACGA CGCAACGCAG CGCGCGTGGC GCGCCGAGTT GCGTCGCCAG
CGTCCGAAGA CCCTCGACGC GCCTTCATGG CTGTGGAAAA GCATCATCGA ACTGATGGCC
GCGCATGAGC AAGCGTATCT CGAACATTGC CGGCGCCATG TGCTCGGCAA GGCGGTCCGC
TGA
 
Protein sequence
MPRMEGGRIV AKKTTGSAKL PACDQRAPIL ANLRSRKMAR SIHTYTRGSA EHFYAWLADH 
RSGTVPDGPA IWIGGDCHLG NLGPVASKTG EVAVQIRDLD QSVIGNPVHD VLRLGFSLAT
AARSSDLPGI ITWRMIEALA DGYEQAFDSR RRDELSHMQR PHEVQIAMKA ALHRSWRKLD
RQTIMNTAPH IPLGKRFWPL SERERSAILT LFETAPVSTI GAALSRTAHC DAGMKVLDAA
FWVKGCSSLG RRRYAVMLDI DDACSDGHPP YLIDIKEARA AKAPKYPGVR MPGDAAQRVL
EGARHVSPML GSRMCAARLD GRAVVMRELM PQDLKLEAER LSEADAVKVA RYLALVIGRA
HAAQMDDATQ RAWRAELRRQ RPKTLDAPSW LWKSIIELMA AHEQAYLEHC RRHVLGKAVR