| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_4077 |
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| Symbol | |
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| ID | 4312972 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008391 |
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| Strand | + |
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| Start bp | 994790 |
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| End bp | 999631 |
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| Gene Length | 4842 bp |
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| Protein Length | 1613 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 638151918 |
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| Product | NAD-glutamate dehydrogenase |
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| Protein accession | YP_775964 |
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| Protein GI | 115358826 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2902] NAD-specific glutamate dehydrogenase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.993105 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.739224 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAAGCGA AGAACGAGGA AGTCGTCGCA CACCTGCTCT CGGATGTCGT CGAATTCGCG
CGCGGGCGCC TGCCCGAAGC CACGTTCCGG ATCGTCGAAC CGTTCCTGCG TCATTACTAC
GACTTCGTCG ACGCCGACGA TCTGCAGGAT CGCAGCATCG CCGACCTGTA CGGCGCCGCG
ATGGCGCACT GGCAGACCGC CCAGAAATTC GTGCCCGGCA GCGAGCGGCT GCGCGTGTAC
AACCCGATCG TCGAGCAGCA CGGCTGGCAC TCGGACCACA CGGTGATCGA GATCGTCAAC
GACGACATGC CGTTCCTCGT CGACTCGGTG ACGATGGCGG TGAACCGCCT CGGGCTCGCG
CTGCACTCCG CGCTGCACCC GGTGTTCCGC ATCTGGCGCG GCGGCAACGG CGGGATCGAG
CGCGTCGACG CCGGCGGCGC GACGGCCCCC GACGGCCAGT CGCAGCTCGC GTCGTTCATC
CATTTCGAAG TCGACCGCTG CGGCGACGCC GCGCTGCTCG ACACGCTGCG CGACGACATC
GCGCGCGTGC TCGGCGACGT GCGCGCGTCG GTCGAGGACT GGCCGAAGAT CGTCGACATC
GCGCGCGCGA CGATCAAGGA CATGAAAGCC CGCGAATCCA CTGCGGAAGA CATCGAGGCG
CGCGCGTTCC TCGAATGGAT GGCGGCCGAC CACTTCACGT TCCTCGGCCA GCGCGACTAC
TCGCTGGTAT CGGACGGGTC GGGCTTCGGG CTGCGCGGCG TCGAGGGCTC CGGCTTCGGC
CTGCTGCGCG AATCGCTGCG GCCGTCGGGC GCGCCGGACG TGACGCCGCT GCCGCCGGCG
GCCGCCGAGA TCATCACCGG CCCCTGGCCG ATCTTCCTGA CCAAGGCGAA CTCGCGCGCG
ACCGTGCACC GGCCCGGCTA CCTCGACTAC GTCGGCGTGA AACTGGTCGG CGCCGACGGC
AAGGTGACCG GCGAGCGCCG CTTCATCGGG CTCTACACGT CGACCGCGTA CATGGTGTCG
AGCGCCGAGA TCCCGATCGT GCGGCGCAAG TGCGCGAACA TCGTGCGGCG CGCGGGCTTC
CTGCCGAAGG GGCATCTCGG CAAGTCGCTG GTGACGGTGC TCGAAACCTA TCCGCGCGAC
GAACTGTTCC AGGCCGACGA AGACCAGCTC TACGACATCG CGCTCGGCAT CCTGCGCCTG
CAGGAGCACC AGCGCACGCG CCTGTTTGTG CGGCGCGACC GCTTCGACCG CTTCGTGTCG
TGCCTCGCGT TCGTGCCGCG CGACAAGTAC AACACCGACC TGCGCCGCCG CATCGCGAAG
CTGCTCGTCG ACGCATACAA CGGCGTGAAC GTCGAATTCA CGCCGCTGCT GTCGGAATCG
GCGATCGCGC GGATTCATTT CGTCGTCCAT GCGGAACCGG GCACGATGCC CGACGTCGAC
ACGCGCGAGC TCGAAGCGCG GCTCGTGCAG GTCGCGCGCC GCTGGCAGGA CGATCTCGCG
GACGCGCTGC TCGACGCGTT CGGCGAAGAG CAAGGCAACC GGCTGCTGCA GCGCTATGCG
GAATCGTTTC CGGCCGGCTA TCGCGACGAC TATCCGGCGC GCACGGCCGT GCGCGACATC
GAGCTGATCG AGCGCGTGAA GGAGTCGGGC CAGCTCGCGA TGAACCTGTA CCGCCCGATC
GAGGCCGGCC CGCGCGCGTT CCGCTTCAAG GTGTATCGCG CGGGCGACCC GATCGCGCTG
TCGCGCAGCC TGCCGATGCT GGAGCATTTG GGCGTGCGCG TCGACGAGGA GCGGCCGTAC
CGGATCCAGA CGCAGGATGC CGCGCCCGCA TGGGTACACG ACTTCGGCCT TGAACTCGCC
GACGATACCG AATTCGACAT CGAGCGCGTG AAGGGCCTGT TCGAGGATGC GTTCGACCGG
ATCTGGAGCG GCCGGATCGA GAACGACGAC TTCAACCGCC TGGTGTTGCG CGCCCACCTG
AGCGCCCGTG AGGTCACGAT CCTGCGGGCG TATGCGAAAT ATCTGCGGCA GGTCGGCTCG
ACGTTCAGCG ACGCATATAT CGAGCGCGCG CTGACCGGCA ACCCGGTGAT CGCACGGCAG
CTCGTCGAGC TGTTCCTGCT GCGCTTCGAC CCGGCCATCG GCGGCACGCG CGACGTGCAG
GCCGAACACC TGCTGAAGGC CATCGAGACG GCGCTCGACC AGGTGCCGAA CCTCGATGAA
GACCGGATCC TGCGCCAGTT CCTCGGCGTG ATCAACGCGA CCGAGCGCAC CAACTATTTC
CTGCTCGACG CGAACGGCGA AGCGAAGCCG TACCTGTCGT TCAAGTTCAA TCCGGCGAAG
GTGCCCGGCC TGCCCGAGCC GAAGCCGATG TTCGAGATCT GGGTGTATTC GCCGCGCGTC
GAGGGCGTGC ACCTGCGCGG CGGGCGCGTC GCGCGCGGCG GGCTGCGCTG GTCCGACCGC
CGCGAGGATT TCCGCACCGA GGTGCTCGGG CTGATGAAGG CGCAGATGGT GAAGAACGTC
GTGATCGTGC CGGTCGGCTC GAAAGGCGGC TTCGTCGTGA AGAACCCGCC GCCGCCGAGC
GATCGCGAAG CGTGGATGCG CGAAGGCATC GCGTGCTATC AAACGTTCCT GCGCGGCCTG
CTCGACCTGA CCGACAATCT CGCCGGCAAC ACGATCGTGC CGCCGCCCGA CGTGGTGCGG
CACGATCCCG ACGATCCGTA TCTCGTCGTC GCGGCCGACA AGGGCACGGC CACCTTCTCC
GATTACGCGA ACGCGATCTC GCACGAATAC GGCTTCTGGC TCGACGATGC GTTCGCGTCC
GGCGGCTCGG TCGGCTACGA CCACAAGAAG ATGGCGATCA CCGCGCGCGG CGCATGGGAA
TCGGTGAAGC GGCACTTCCG CGAGATGGGC GTCGATACGC AGACGACCGA TTTCACCGTG
GTCGGCGTCG GCGACATGTC GGGCGACGTG TTCGGCAACG GGATGCTGCT GTCGCCGCAT
ATCCGGCTCG TCGCCGCTTT CGATCACCGG CACGTGTTCC TCGATCCGAA CCCCGACCCG
GCGACGAGCT TCGCGGAGCG CGAGCGGATG TTCGCGCTCG AACGCTCGAG CTGGGCCGAC
TACGACACCT CCGTGATCTC GCAGGGCGGC GGCGTGTACG CGCGCACCGC GAAGACGATC
CCGCTGTCGC CGGCCGTGCA GGCCGCGCTC GGCATCGACG CGCAGGCGCT GCCGCCGACC
GAGCTGATCC GCGCGATCCT GCAGGCGCCG GTCGACCTGC TGTACAACGG CGGCATCGGC
ACCTACGTGA AGGCCGCGCA CGAAAGCCAC CAGCAGGTCG GCGATCGGGC GAACGACGCG
GTGCGCGTGA ACGGCGCGGA CCTGCGCTGC AAGGTCGTCG GCGAAGGCGG CAACCTCGGC
TGCACGCAGT TCGGCCGCAT CGAGTTCGCG CAGCGCGGCG GGCGCATCAA CACCGACGCG
ATCGACAACT CGGCGGGCGT CGATTGTTCG GATCACGAAG TCAACATCAA GATCCTGCTC
GGCCTCGTCG TCAGCGACGG CGAGATGACC GAGAAGCAGC GCAACGCCCT GCTCGCGGAA
ATGACCGACG AAGTCGGGCT GCTGGTGCTG CGCGACAACT ACTACCAGAC GCAGGCGCTG
TCGATCGCGG GCCGCTACAG CGTCGAGCTG CTCGACGCCG AGGCGCGCCT GATGCGCTGG
CTCGAACGCG CGGGCCGCCT GAACCGCGTG ATCGAGTTCC TGCCGACCGA CGATGAGATC
GCCGAACGGC AAACCGCGAA ACAGGGCCTG ACGTCGCCGG AGCGCGCGGT GCTGCTCGCG
TACAGCAAGA TGTGGCTGTA CGACGCGCTG CTCGACTCCG ACGTCCCGGA GGATCCGCTC
GTCGCCGCGA TGCTCGTCGA CTATTTCCCG ACGCCGCTGC AACAGCGCTT CAACGAACCG
ATGCAGCGCC ACCCGCTGCG TCGCGAGATT CTCGCGACGC ACCTGACCAA TGCGCTCGTC
AACCGCGTCG GCTGTGCGTT CGTGCACCGG CTGATGGAGG AAACCGACGC GAAGCCGGGC
GACATCGTGC GCGCGTGCAT CATGGCGCGC GACGTGTTCG ATCTCGATGC GGTGTGGCGC
GACATCGATG CGCTCGACAA CCGCGTCGCC GACGACGTGC AGGCGCGCAT GTTCGTCGAC
GTCGCACGGC TGCTGGAGCG CGCGGCGCTG TGGTTCCTGC GGCAGCTGCA ATCGGGCGCG
GTCGCCAACG GCGGCGTCGC CGGCTTGATC GCGCGCTGCC GCGACGCGGT GCAGCGCCTC
GCGCCGCAAT TGCCGTCGCT GCTGCCGACG AGCGATCTCG AAGCGTTGTC CGAGCGGCAG
CGCGTACTGG TGGACGCCGG CGTCGACAGC GCGCTCGCCG GGCGCGTCGC GAACGGCGAC
ATCTCCGCCG CGCTGCTCGA CATCGCCGAA GTGGCCGCGA CTTGCGATCG CAGCCTCGAG
CTGGTCGCGG GCGTGTACTT CTCGCTCGGC ACGCTGCTGA ACTACCGGTG GATCGGCGAA
CGCGCGGCCA CGCTGCCGGC GCCGACGCAC TGGGACATGC TGGCGCGCGC GGCCGCGCTC
GCGGAAATCG CGCGGCTCAA GCGCACGCTT GCCACCAGCG CGCTGGCGGA ATCGGCCGAC
TCGACGGCGC CGGAGACGAT CGTCCACGCG TGGCGCGAAC GCCGCGAAGC CGCGCTGGAG
CGCTACGAGC ATCTGCTCGC CGACTTGCGC GCGTCGGGTG GCGCGAGCCT CGCGGTGCTG
CTCGTGATCG TGCGCGAGAT GGCCGTGCTG GAACGCGCGT GA
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| Protein sequence | MEAKNEEVVA HLLSDVVEFA RGRLPEATFR IVEPFLRHYY DFVDADDLQD RSIADLYGAA
MAHWQTAQKF VPGSERLRVY NPIVEQHGWH SDHTVIEIVN DDMPFLVDSV TMAVNRLGLA
LHSALHPVFR IWRGGNGGIE RVDAGGATAP DGQSQLASFI HFEVDRCGDA ALLDTLRDDI
ARVLGDVRAS VEDWPKIVDI ARATIKDMKA RESTAEDIEA RAFLEWMAAD HFTFLGQRDY
SLVSDGSGFG LRGVEGSGFG LLRESLRPSG APDVTPLPPA AAEIITGPWP IFLTKANSRA
TVHRPGYLDY VGVKLVGADG KVTGERRFIG LYTSTAYMVS SAEIPIVRRK CANIVRRAGF
LPKGHLGKSL VTVLETYPRD ELFQADEDQL YDIALGILRL QEHQRTRLFV RRDRFDRFVS
CLAFVPRDKY NTDLRRRIAK LLVDAYNGVN VEFTPLLSES AIARIHFVVH AEPGTMPDVD
TRELEARLVQ VARRWQDDLA DALLDAFGEE QGNRLLQRYA ESFPAGYRDD YPARTAVRDI
ELIERVKESG QLAMNLYRPI EAGPRAFRFK VYRAGDPIAL SRSLPMLEHL GVRVDEERPY
RIQTQDAAPA WVHDFGLELA DDTEFDIERV KGLFEDAFDR IWSGRIENDD FNRLVLRAHL
SAREVTILRA YAKYLRQVGS TFSDAYIERA LTGNPVIARQ LVELFLLRFD PAIGGTRDVQ
AEHLLKAIET ALDQVPNLDE DRILRQFLGV INATERTNYF LLDANGEAKP YLSFKFNPAK
VPGLPEPKPM FEIWVYSPRV EGVHLRGGRV ARGGLRWSDR REDFRTEVLG LMKAQMVKNV
VIVPVGSKGG FVVKNPPPPS DREAWMREGI ACYQTFLRGL LDLTDNLAGN TIVPPPDVVR
HDPDDPYLVV AADKGTATFS DYANAISHEY GFWLDDAFAS GGSVGYDHKK MAITARGAWE
SVKRHFREMG VDTQTTDFTV VGVGDMSGDV FGNGMLLSPH IRLVAAFDHR HVFLDPNPDP
ATSFAERERM FALERSSWAD YDTSVISQGG GVYARTAKTI PLSPAVQAAL GIDAQALPPT
ELIRAILQAP VDLLYNGGIG TYVKAAHESH QQVGDRANDA VRVNGADLRC KVVGEGGNLG
CTQFGRIEFA QRGGRINTDA IDNSAGVDCS DHEVNIKILL GLVVSDGEMT EKQRNALLAE
MTDEVGLLVL RDNYYQTQAL SIAGRYSVEL LDAEARLMRW LERAGRLNRV IEFLPTDDEI
AERQTAKQGL TSPERAVLLA YSKMWLYDAL LDSDVPEDPL VAAMLVDYFP TPLQQRFNEP
MQRHPLRREI LATHLTNALV NRVGCAFVHR LMEETDAKPG DIVRACIMAR DVFDLDAVWR
DIDALDNRVA DDVQARMFVD VARLLERAAL WFLRQLQSGA VANGGVAGLI ARCRDAVQRL
APQLPSLLPT SDLEALSERQ RVLVDAGVDS ALAGRVANGD ISAALLDIAE VAATCDRSLE
LVAGVYFSLG TLLNYRWIGE RAATLPAPTH WDMLARAAAL AEIARLKRTL ATSALAESAD
STAPETIVHA WRERREAALE RYEHLLADLR ASGGASLAVL LVIVREMAVL ERA
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