| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_4060 |
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| Symbol | |
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| ID | 4312955 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008391 |
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| Strand | + |
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| Start bp | 980338 |
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| End bp | 981186 |
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| Gene Length | 849 bp |
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| Protein Length | 282 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 638151901 |
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| Product | MerR family transcriptional regulator |
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| Protein accession | YP_775947 |
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| Protein GI | 115358809 |
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| COG category | [K] Transcription |
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| COG ID | [COG0789] Predicted transcriptional regulators |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.00710658 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.227534 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCAAAAC AGACTCCCCC CATGCCGGAC GAGGCCGCCG CGAATTCCCG CAACGAGTAC
ACGGTCGACG AACTCGCGCG CGTGTCCGAC ACGACCGTGC GCAACGTGCG TGCGTACCAG
GATCGCGGGC TGCTCGCGCC GCCCGAGAAG CGCGGGCGCG TCGGCATCTA CGACGACACG
CACGTCGCCC GCCTGAAGCT GATCAACCAT CTGCTCGCAC GCGGCTACAC GCTGTCGAAC
ATCCAGGATC TGATCAAGGC GATCGACGAA GGTCACGACC TGCGCTCGAT CCTCGGCCTG
GAAAACGCGA TCGGCGGCCG CTGGTCGCAC GAACTGCCGA AAACCTATTC GCTCGCCGCC
CTCGCGCAGA TGTTCGGCCC GCAGACGGCG TCGCAACTAT CGCGCGTGAC CGAGCTCGGG
CTGCTCGAAC GGCACGGCCT GTCGTTCGTC GCGAAAAGCC CCGCGCTGCT CGAGGCAGCG
GCCGCGATGG CGAAGGAAGG CATCCCGCCG CGCGAACTGC TCGACGTGAT CAGCCTCGCG
CGGCCGCACT TCGACGCGAT CGCGCGGCTG CTCGTCGATC TCGTCGTGAA GCGGCTCGAC
CGCTACGACG AAGGCACGCT GCCGCCGGTG ACCGACGTGC CCGCGCTCGT CGATGCAATC
TGGCGCCTGC GCCCGCTCGC GGCCGTGTTC GTCGAAGGCG AGACGAACCG CGCGCTCGAG
AACGCGGCAA GCGCCTATCT CGGTGGGCGC GTCGCGACGA TTCTCGACAA GAAGCTCAGC
GACGAGGCGG CGCGGCAATC CGGCGCGACC GATACGTCCG ATCCGCAACG CGACGGCGAC
AAAGCATAG
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| Protein sequence | MSKQTPPMPD EAAANSRNEY TVDELARVSD TTVRNVRAYQ DRGLLAPPEK RGRVGIYDDT
HVARLKLINH LLARGYTLSN IQDLIKAIDE GHDLRSILGL ENAIGGRWSH ELPKTYSLAA
LAQMFGPQTA SQLSRVTELG LLERHGLSFV AKSPALLEAA AAMAKEGIPP RELLDVISLA
RPHFDAIARL LVDLVVKRLD RYDEGTLPPV TDVPALVDAI WRLRPLAAVF VEGETNRALE
NAASAYLGGR VATILDKKLS DEAARQSGAT DTSDPQRDGD KA
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