Gene Bamb_4059 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_4059 
Symbol 
ID4312954 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008391 
Strand+ 
Start bp979705 
End bp980328 
Gene Length624 bp 
Protein Length207 aa 
Translation table11 
GC content72% 
IMG OID638151900 
ProductGCN5-related N-acetyltransferase 
Protein accessionYP_775946 
Protein GI115358808 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1247] Sortase and related acyltransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.0540643 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones8 
Fosmid unclonability p-value0.214927 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTTTAC CGCCCCGCCC AGCGGCCGGC ATAGTAGCGG TTTCGTCCCC CCGCTCCGCC 
ACCATGTCCG CTGCTGCCGC CTGCGTCGTC CGCGACGCGA CCGAGTCCGA TCTCGCCGCC 
ATTCACGCGA TCTACGCGCA CCACGTGCGC CACAGCGTCG CGTCGTTCGA GGAGACGCCG 
CCCGACGTCG ACGAACTGCG CGCGCGCCGC GACGCGGTGC TGCGTCACGG GCTGCCCTAT 
CTCGTCGCGG AATGCGATGG CCGCATCGCC GGCTACGCGT ATGCGACGCC GTATCGCACG 
CGCAGCGCAT ACCGTCACAC GATCGAGGAC TCGATCTACA TCGACGACGC CCAGCGCGGC 
CGCGGCATCG GCCGCGCGCT GCTCGCGGCG CTGATCGCGC GGTGCGAGAC CGGCCCGTGG 
CGACAGATGA TCGCGGTGAT CGCCGACGGC GGCACCGGCG GCTCGACATC GCTGCACCGC 
GCATTCGGTT TCGAGGCGGC GGGCGTGCTG AAGGCGGTCG GTTTCAAGCA CGGTCGCTGG 
ATCGATACCG CGCTGATGCA GCGCGCGCTC GGCGACGGCG CACGCACGCT CCCCGCCTCG 
CCCGAGCCTG TCGCGTCGCG CTAG
 
Protein sequence
MPLPPRPAAG IVAVSSPRSA TMSAAAACVV RDATESDLAA IHAIYAHHVR HSVASFEETP 
PDVDELRARR DAVLRHGLPY LVAECDGRIA GYAYATPYRT RSAYRHTIED SIYIDDAQRG 
RGIGRALLAA LIARCETGPW RQMIAVIADG GTGGSTSLHR AFGFEAAGVL KAVGFKHGRW 
IDTALMQRAL GDGARTLPAS PEPVASR