| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_4042 |
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| Symbol | |
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| ID | 4312937 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008391 |
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| Strand | + |
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| Start bp | 960434 |
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| End bp | 961192 |
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| Gene Length | 759 bp |
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| Protein Length | 252 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 638151883 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_775929 |
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| Protein GI | 115358791 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4221] Short-chain alcohol dehydrogenase of unknown specificity |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.782191 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTGCCT CGAAGAAGTT CGCCGCCGTC ACGGGCGCGG GATCCGGCAT CGGTCGTGCC
GCCGCCATCG CACTCGCGAA CGCCGGATTT ACCGTCGCGC TGATCGGACG CAACGAAGCG
TCGTTGCTTG AAACGAAAGA GAAGATCGCC GCCGGCCATG GCGACGCATA TGCGCTGCTG
GCCGACGTCA CCGACGAAGC GTCGGTCGAA CATGCGTTCT CGCGGATTTC GCGCGAGTTC
GGCCGGCTGG ATGTCCTCTT CAACAACGCC GGCCGCAACG CGCCGGCCGT TCCGCTCGAC
GAATACGAAC TCGACGTGTG GAACGACGTC GTCGCGACGA ACCTGACGGG CGTCTTCCTG
TGCGCGCGGG CAGCGTGGCG CCTGATGAAG GCGCAAACGC CGCAGGGTGG CCGGATCATC
AACAACGGCT CGATCTCCGC CTATACGCCG CGCCCGAACA CGATCGCCTA CACGGCCACC
AAGCATGCGG TGGCCGGCAT CACCAAGTCG CTCGCGCTCG ACGGCCGTGC GTACAACATC
GCGTGCAGTC AGATCGACAT CGGCAACGCG GCGACGTCGC TCACCGACCG GATGACGGAC
GGCGTGCTGC AGGCCGACGG ACGCATGGCG CCCGAGGCGC GCATGGACGT CACGCATGTC
GCGAACGCGG TCGTTCAGAT GGCAAGCCTT CCGCTGGATA CGAACATCCT GAACATGACG
ATCATGGCGA CCACGATGCC GTTCGTGGGG CGCGGATAA
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| Protein sequence | MSASKKFAAV TGAGSGIGRA AAIALANAGF TVALIGRNEA SLLETKEKIA AGHGDAYALL
ADVTDEASVE HAFSRISREF GRLDVLFNNA GRNAPAVPLD EYELDVWNDV VATNLTGVFL
CARAAWRLMK AQTPQGGRII NNGSISAYTP RPNTIAYTAT KHAVAGITKS LALDGRAYNI
ACSQIDIGNA ATSLTDRMTD GVLQADGRMA PEARMDVTHV ANAVVQMASL PLDTNILNMT
IMATTMPFVG RG
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