| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_4032 |
|---|
| Symbol | |
|---|
| ID | 4312927 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria AMMD |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008391 |
|---|
| Strand | + |
|---|
| Start bp | 949702 |
|---|
| End bp | 950598 |
|---|
| Gene Length | 897 bp |
|---|
| Protein Length | 298 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 638151873 |
|---|
| Product | LysR family transcriptional regulator |
|---|
| Protein accession | YP_775919 |
|---|
| Protein GI | 115358781 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.304156 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGCTTCG ACCTGACCGA CCTGCGGCTC TTCCTGAACA TCTGCGAGGC CGGCACGATC
ACGGGCGGCG CCGAGCGCAC CCACATCACG CTGCAGGCCG CGAGCGAGCG GATCCGCGGG
ATGGAGGACG AACTCGGCGT GCCGCTGCTG CATCGGGCCA AGTCGGGCAC GCAGGTGACC
GACGCCGGCC GCACGCTCGA GCACCACGCG CGCACGGTGC TGCAGCAGAT CGACCACATG
CGCGGCGAAC TGCAGCAATA CGGCCAGGGG CTGCGCGGGC ATATCCGACT GCTGTGCAAC
ACGGCGTCGC TGAGCGAATA CCTGCCGGAC GCGCTCGCCG CGTATCTGCC GCATCACCCG
AAACTGTCGA TCAGCGTCGA GGAGCGCTCG AGCCAGGAGA TCGTCCATGC GATCCGCAAC
AAGACGGCCG AGGTCGGCAT CGTCGCCGAT TCGGTCGGGC TCGGCGGGCT CGAACAGAAG
CCGTTCCGCG AGGACTGGCT GATCGCGGTC GTGCCGGCCG GGCATCCGCT CGCCGCGCGC
GACAAGGTCG CGTTCGACGA GATCGCCGAC GCGGATTTCA TCGGACTGAC CGACGGCAGC
GCGCTGCAGG TCCATCTCGC GGACCAGGCG CGTGCGCTCG GCAAGCGGAT TCGCTACCGT
GTCCAGTTGA AGAGTTTCGA TGCGATCTGC CGCGTGATCG AAAGCGGCGT GGGCATCGGC
ATCGTGTCGC GCCATGCGGC CGAGCGCGCG ATGCAGACGA TGGACGTGCG GCTCGTCGAG
CTGTCCGACG CGTGGAGCCA CCGCAAGCTG ACGCTCTGCG CGCGATCGTT CGATGCGCTG
CCGAAATATA CGCAGGCGTT CGTGTCGTAT CTGTCGGGCG AGACACCGCC GCGCTGA
|
|---|
| Protein sequence | MRFDLTDLRL FLNICEAGTI TGGAERTHIT LQAASERIRG MEDELGVPLL HRAKSGTQVT
DAGRTLEHHA RTVLQQIDHM RGELQQYGQG LRGHIRLLCN TASLSEYLPD ALAAYLPHHP
KLSISVEERS SQEIVHAIRN KTAEVGIVAD SVGLGGLEQK PFREDWLIAV VPAGHPLAAR
DKVAFDEIAD ADFIGLTDGS ALQVHLADQA RALGKRIRYR VQLKSFDAIC RVIESGVGIG
IVSRHAAERA MQTMDVRLVE LSDAWSHRKL TLCARSFDAL PKYTQAFVSY LSGETPPR
|
|---|
| |