| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_4002 |
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| Symbol | |
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| ID | 4312898 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008391 |
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| Strand | + |
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| Start bp | 912585 |
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| End bp | 914042 |
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| Gene Length | 1458 bp |
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| Protein Length | 485 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 638151844 |
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| Product | EmrB/QacA family drug resistance transporter |
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| Protein accession | YP_775890 |
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| Protein GI | 115358752 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACGACA CGCGCACTCG GCCGGCGCCG GGCCATGCGG CCGGCCGGCT CGATCCGGCG
ATCTGGAAAG TCAGCGCGGT CGCGACGCTC GGCGGGCTGC TGTCGCAGCT CGACGCGACG
ATCGTCAACG TATCGCTGTC GAGCCTCGCG ACCGACCTGC ACGCGAGCCT GTCGACGATC
CAGTGGGTGA CGAGCGGCTA CCTGCTCGCG CTCACGCTGG TGTTGCCGCT GAACGGCTGG
CTCGTCGACC GCATCGGTGC GAAGGCGCTG TACCTGTGGT GTTTCTCCGC GTTCACGCTG
ACGTCGGCGC TGTGCGGGCT CGCGTGGTCC GCACCGTCGC TGATCGCGTT CCGTGTGCTG
CAAGGCGTCA GCGGCGGGCT GCTCGCGCCG ATGGCGCAGA TGATGATCGC GCGCGTGGCC
GGCCAGCAGA TGGCGCGCGT GATCGGTTAT GCGGCAGTTC CCGTGCTGAT CGCGCCGATC
CTGGGGCCTG TCGTCGCCGG TGCGATCCTG CAGCACGCGT CGTGGCGCTG GCTCTTTCTC
GTGAACCTGC CGGTCGGCGC GCTGGCGCTT GCGCTGGCCG TGTGGTTCCT GCCCGGCGAT
CGCGACGAAA CGCAGCGACG CGAACTCGAT TGGGTGGGCC TGGCGCTGCT GTCGCCGGCG
CTCGTGCTGT TCCTGTATGG CGCGGAGCGG ATCGACGCCG TGCCGGGTAT CGCGGCAATC
GCGGGTTCGG TGCTGCTGCT CGCGGCGTTC CTGCGCGTCG AGCGACGCAA AGGCGAGCGT
GCGCTGATCG ATGTCGCGCT GTTTCGCGCG CGCGTGTTCG GCGCGGCCGC CGCCACGCAG
TTCCTGTCGA ATGGCGCGAT CTACGCGGGC CAGATGCTGA TTCCGGTATT CCTGATCCAG
GCGTGCGGCC GCTCGCCCGG CGAGATGGGC TGGCTGCTGG CTCCGCTCGG GCTCGGCATG
CTCGTCACGT ATCCGTTGAT GGGTACGCTG ACGAGCCGGT TCGGCGTGCG CCGGCTGGCC
GCCGCCGGCG CGATGCTCGC GCTCGTCGCG ACGCTGCCGA TCGTGTATCT CGCGCTGACC
GGCTACGATC CCTACGTGCT GGTGCCCGCG CTGTTCGTGC GCGGAATGGG CCAGAGCGCG
ATCGGCATCC CGTCGATGTC TGCCGCGTAT GCGTCGGTCG AACGGCGCAA CCTGCCGATG
GCGACGACGT CGCTCAATAT CGTTCAGCGC CTCGGCGGCC CGACGTTCAC GACGCTCTGC
ACGCTGTTTC TCACATGGCG GCTGCAGGCC GAATCCGTGT CGACGGGCGG CACGCACGGA
GCCGCCTACG CGTGGGCGTT CGGCCTGCTT TGCGCGCTGC ATGCGGCGAG CTTCGTGACG
ACGCTGCGGC TGCCGCGATG GTCGAGCGGC GCGGGCGCAC GGCCGACGGG GGTGCGCGAG
TCGGTTCGCG CTGAATGA
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| Protein sequence | MNDTRTRPAP GHAAGRLDPA IWKVSAVATL GGLLSQLDAT IVNVSLSSLA TDLHASLSTI
QWVTSGYLLA LTLVLPLNGW LVDRIGAKAL YLWCFSAFTL TSALCGLAWS APSLIAFRVL
QGVSGGLLAP MAQMMIARVA GQQMARVIGY AAVPVLIAPI LGPVVAGAIL QHASWRWLFL
VNLPVGALAL ALAVWFLPGD RDETQRRELD WVGLALLSPA LVLFLYGAER IDAVPGIAAI
AGSVLLLAAF LRVERRKGER ALIDVALFRA RVFGAAAATQ FLSNGAIYAG QMLIPVFLIQ
ACGRSPGEMG WLLAPLGLGM LVTYPLMGTL TSRFGVRRLA AAGAMLALVA TLPIVYLALT
GYDPYVLVPA LFVRGMGQSA IGIPSMSAAY ASVERRNLPM ATTSLNIVQR LGGPTFTTLC
TLFLTWRLQA ESVSTGGTHG AAYAWAFGLL CALHAASFVT TLRLPRWSSG AGARPTGVRE
SVRAE
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