Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bamb_3986 |
Symbol | |
ID | 4312882 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria AMMD |
Kingdom | Bacteria |
Replicon accession | NC_008391 |
Strand | + |
Start bp | 895377 |
End bp | 896051 |
Gene Length | 675 bp |
Protein Length | 224 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 638151828 |
Product | GntR family transcriptional regulator |
Protein accession | YP_775874 |
Protein GI | 115358736 |
COG category | [K] Transcription |
COG ID | [COG1802] Transcriptional regulators |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.963053 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.126753 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCAAGCG AAAAAGCGCG AGGACAGTCG GTCGCCGACC GGATCAGCCA TCAACTGCGC GAACACATCA TCAGCGGCAA GCTGCCGCCC GGCACCGCGC TGATCGAGAT GGACCTCGCG GCCGAATACG ACACGTCGCG CAACTCGCTT CGCGAAGTCC TGCATCAGCT CGGCCGTGAA GGGCTCGTCA CGTTCGTGCG GCACAAGGGC GTGGTCGTGC GCACGCTGAA TCGCCAGGAC GTGCGCGATC TCTACGTCGC GCGCCGCACG CTCGAACTGC ATGCGTTGAA CACGGCGGAA CTCGCGCAGC CTGCACTGCT CGAGAAAATG CAGAGCGCCA TTCGCGCGGC CGAACGCGAG CTCGCCAAGG AAAACTGGCA GGCCGTCGGC ACGCACAGCC TGCGATTCCA CCAGCACATC GTCGCGCTGC AGAAGTCGGC GCTGCTCGAC GAGTTCTTCC GGACCATCTC GGCACAGCTG CGCCTCGTCT TCGCCGCCGA TCCCGACGAA AAGCGCGTGC AAACGCCCGA CTGGATCCAG CGCGAATACC AGATCTACGA CCTGCTCACG CAGAACCGTC GCAGCGAAGC CGTTACCACC CTCGCGCGCT ATCTCGACGA TTCCGAGCGG ATGCTCGTCG ACGCGATCAA GCGCAGCCAC CGCGAGGCGG CCTGA
|
Protein sequence | MASEKARGQS VADRISHQLR EHIISGKLPP GTALIEMDLA AEYDTSRNSL REVLHQLGRE GLVTFVRHKG VVVRTLNRQD VRDLYVARRT LELHALNTAE LAQPALLEKM QSAIRAAERE LAKENWQAVG THSLRFHQHI VALQKSALLD EFFRTISAQL RLVFAADPDE KRVQTPDWIQ REYQIYDLLT QNRRSEAVTT LARYLDDSER MLVDAIKRSH REAA
|
| |