| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_3972 |
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| Symbol | |
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| ID | 4312868 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008391 |
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| Strand | + |
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| Start bp | 870864 |
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| End bp | 872189 |
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| Gene Length | 1326 bp |
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| Protein Length | 441 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 638151814 |
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| Product | major facilitator transporter |
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| Protein accession | YP_775860 |
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| Protein GI | 115358722 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.107532 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAAACGT CCGCCCTTTC GTTCGCCGGC TCGCAGGTCG ATGCCCGCGC CGCCGCGAAG
AAGCGCCGCC TGATCGCGGC CGCCGCGGTC GGCAACGCGC TCGAGTTCTA CGACTTCACG
GTCTACAGCT TCTTCGCGAT CCTGATCGGC AAGCTGTTCT TTCCCGTGCA CTCGTCGTTC
GGGCAGTTGA TGCTCGCGGT CGCGAGCTTC GGCGTTGGCT TCGTCACGCG TCCGCTCGGC
GGGCTCGTGA TCGGCATGTA CGCCGACCGC GCCGGCCGCA AGAAGGCGAT GATCCTCACG
CTGCTGCTGA TGGCGCTGGG CACCGCGACG ATCGCGGTCG CGCCGACCTT CGCGCAGATC
GGCCTCGCCG CACCGCTGCT GCTCGTGCTC GCGCGGCTCC TGCAGGGGTT CGCGTCGGGC
GGCGAAGTCG GCGCGTCGAC GACGCTGCTG CTCGAACAGG CGCCGCAGCA CCGCCGCGGC
TTCTACGCGT CGTTTCAGTT CTCGAGCCAG GGGCTTGCCG CGCTCGCGGG GGCGCTGACC
GGCGTCGCGC TCACGTCGAC ACTCAATGCC GCGCAGCTCG AAAGCTGGGG CTGGCGCGTG
CCGTTCATCA TCGGCACGCT GTTCGTGCCG CTCGGCTACT GGCTGCGCCG CACCGTCGAG
GAAGTGCCGC CTGCCGCGCC CGCAGCCGCC GCCACGCACG ACGAGCCGGT CGCGTCGCTG
CCGCTCGCCG CCGTGCTGCG CCATCACGGC AAGGCCGTGT TCGCGGGCCT CGGCGTGACG
ATCGGCGGCA CGTCGATCCA CTACATCATC GTGTTCTACA TGGCGATCTA CGGCGTGCAG
GTGCTGCACC TGCCGACCTG GCTGTCGATG ACGGCCGGCT GCGTCGCCGG CGCGATCCTG
ATGCTCGTGA CGCCGATCGG CGGCCACCTC TCGGATATCT ATGGACGCAA CCGGATCGCC
TGGTGGACGC GCATCGTGCT GATGGCCGCG ATCTATCCGG CGTTCATTGC GCTGAACCGC
TGGCCGGGCG CCGCGTCGCT GCTCTCGATC ATCGCTGCGC TGTCGATCGT GCACGCGATC
AACATCGGCG CGACGGGTGC GATGCTCGGC GAATTGTTCC CGCGCGCGGT GCGGGCGACC
GGCGGTGCGC TGGTGTATAG CGTGGGCGTC GCAATCTTCG GCGGCTTCGC GCAGTTCTTC
GTCACGTGGC TGATCGCGGC GACCGGGAAT GCGAATGCGC CTGCGTGGTA TGCGATCGGG
TGTGGCGCGT TCACGCTGCT TGCGATTCGG TGCATGGATG AGAAGGCGGG GAAGGCGCTT
GATTGA
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| Protein sequence | METSALSFAG SQVDARAAAK KRRLIAAAAV GNALEFYDFT VYSFFAILIG KLFFPVHSSF
GQLMLAVASF GVGFVTRPLG GLVIGMYADR AGRKKAMILT LLLMALGTAT IAVAPTFAQI
GLAAPLLLVL ARLLQGFASG GEVGASTTLL LEQAPQHRRG FYASFQFSSQ GLAALAGALT
GVALTSTLNA AQLESWGWRV PFIIGTLFVP LGYWLRRTVE EVPPAAPAAA ATHDEPVASL
PLAAVLRHHG KAVFAGLGVT IGGTSIHYII VFYMAIYGVQ VLHLPTWLSM TAGCVAGAIL
MLVTPIGGHL SDIYGRNRIA WWTRIVLMAA IYPAFIALNR WPGAASLLSI IAALSIVHAI
NIGATGAMLG ELFPRAVRAT GGALVYSVGV AIFGGFAQFF VTWLIAATGN ANAPAWYAIG
CGAFTLLAIR CMDEKAGKAL D
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