Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bamb_3958 |
Symbol | |
ID | 4312854 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria AMMD |
Kingdom | Bacteria |
Replicon accession | NC_008391 |
Strand | - |
Start bp | 855425 |
End bp | 856225 |
Gene Length | 801 bp |
Protein Length | 266 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 638151800 |
Product | enoyl-CoA hydratase/isomerase |
Protein accession | YP_775846 |
Protein GI | 115358708 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1024] Enoyl-CoA hydratase/carnithine racemase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.31062 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.506676 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATGGAT TGAAGACCCT GGCCGTTGCC GTCGATGCGC GCGGCATCGC GACCGTCGCG CTGCAGCGCG GCGACGTGCT CAACGCGTTC GACGAAACGA TGATCGCCGA GCTGACCGAC GCGTTCACGA CGCTCGGCCG GCGCGACGAC GTGCGCGCGA TCGTGCTGCG CTCGGACGGC CGCGCGTTCT GCGCGGGCGC CGACCTGCAG TGGATGCAGC GCGCGAGCGC GAACGACGCG GCCGCGAACC TGCGCGACGC CGAGCGGTTC GCCGCGATGA TGCGCGCGAT CCGGCAGTGC CCGAAGCCGA CGGTCGCCCG CGTGCAGGGC CACGCGTTCG GCGGCGGCGT CGGCCTGTGC GCGGCCTGCG ACATCGTGAT CGCGAGCGAT CATGCGCGTT TTTCGGTCAG CGAGGCACGG TTCGGGATCC TGCCGTCGGT GATCGGCCCG TATCTGGTCG AAGCGGTCGG CCAGCGCCAG GCGCGCCGGC TCGCGCTGAC CGCGACGCAG CTCGCGGCCG GCGAAGCCGT CGCGATCGGG CTGATCCACC AGGCCGTGCC GCTCGACGCG CTCGACGCAG CACTCGACAA GACGCTCGCG GAGCTGAGCC GCAACGGCCC CAACGCGCTG ATGGAGATCA AGCGCTTTTT CGACGCGATC GGCGAGTACC CGCCGTCGGA AGAACGCTCG GCGTTCACCG CGCAGACGAT CTCGCGCGTG CGGGCCACGC CGGAAGCGAA GGAGGGCTTC GCCGCGTTCT TCGCGAAGCG GCCGCCGGCG TGGGAGCCGG GCACCGACTG A
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Protein sequence | MDGLKTLAVA VDARGIATVA LQRGDVLNAF DETMIAELTD AFTTLGRRDD VRAIVLRSDG RAFCAGADLQ WMQRASANDA AANLRDAERF AAMMRAIRQC PKPTVARVQG HAFGGGVGLC AACDIVIASD HARFSVSEAR FGILPSVIGP YLVEAVGQRQ ARRLALTATQ LAAGEAVAIG LIHQAVPLDA LDAALDKTLA ELSRNGPNAL MEIKRFFDAI GEYPPSEERS AFTAQTISRV RATPEAKEGF AAFFAKRPPA WEPGTD
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