Gene Bamb_3958 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_3958 
Symbol 
ID4312854 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008391 
Strand
Start bp855425 
End bp856225 
Gene Length801 bp 
Protein Length266 aa 
Translation table11 
GC content72% 
IMG OID638151800 
Productenoyl-CoA hydratase/isomerase 
Protein accessionYP_775846 
Protein GI115358708 
COG category[I] Lipid transport and metabolism 
COG ID[COG1024] Enoyl-CoA hydratase/carnithine racemase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.31062 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.506676 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATGGAT TGAAGACCCT GGCCGTTGCC GTCGATGCGC GCGGCATCGC GACCGTCGCG 
CTGCAGCGCG GCGACGTGCT CAACGCGTTC GACGAAACGA TGATCGCCGA GCTGACCGAC
GCGTTCACGA CGCTCGGCCG GCGCGACGAC GTGCGCGCGA TCGTGCTGCG CTCGGACGGC
CGCGCGTTCT GCGCGGGCGC CGACCTGCAG TGGATGCAGC GCGCGAGCGC GAACGACGCG
GCCGCGAACC TGCGCGACGC CGAGCGGTTC GCCGCGATGA TGCGCGCGAT CCGGCAGTGC
CCGAAGCCGA CGGTCGCCCG CGTGCAGGGC CACGCGTTCG GCGGCGGCGT CGGCCTGTGC
GCGGCCTGCG ACATCGTGAT CGCGAGCGAT CATGCGCGTT TTTCGGTCAG CGAGGCACGG
TTCGGGATCC TGCCGTCGGT GATCGGCCCG TATCTGGTCG AAGCGGTCGG CCAGCGCCAG
GCGCGCCGGC TCGCGCTGAC CGCGACGCAG CTCGCGGCCG GCGAAGCCGT CGCGATCGGG
CTGATCCACC AGGCCGTGCC GCTCGACGCG CTCGACGCAG CACTCGACAA GACGCTCGCG
GAGCTGAGCC GCAACGGCCC CAACGCGCTG ATGGAGATCA AGCGCTTTTT CGACGCGATC
GGCGAGTACC CGCCGTCGGA AGAACGCTCG GCGTTCACCG CGCAGACGAT CTCGCGCGTG
CGGGCCACGC CGGAAGCGAA GGAGGGCTTC GCCGCGTTCT TCGCGAAGCG GCCGCCGGCG
TGGGAGCCGG GCACCGACTG A
 
Protein sequence
MDGLKTLAVA VDARGIATVA LQRGDVLNAF DETMIAELTD AFTTLGRRDD VRAIVLRSDG 
RAFCAGADLQ WMQRASANDA AANLRDAERF AAMMRAIRQC PKPTVARVQG HAFGGGVGLC
AACDIVIASD HARFSVSEAR FGILPSVIGP YLVEAVGQRQ ARRLALTATQ LAAGEAVAIG
LIHQAVPLDA LDAALDKTLA ELSRNGPNAL MEIKRFFDAI GEYPPSEERS AFTAQTISRV
RATPEAKEGF AAFFAKRPPA WEPGTD