Gene Bamb_3953 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_3953 
Symbol 
ID4312849 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008391 
Strand
Start bp850415 
End bp851479 
Gene Length1065 bp 
Protein Length354 aa 
Translation table11 
GC content68% 
IMG OID638151795 
Productalcohol dehydrogenase 
Protein accessionYP_775841 
Protein GI115358703 
COG category[E] Amino acid transport and metabolism
[R] General function prediction only 
COG ID[COG1063] Threonine dehydrogenase and related Zn-dependent dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGGCCG CCGTCTGGCA CGGCCGCAAC GACATCCGCG TGGAAGAAGT TCCCGTTCCG 
GCGCACCCGC CGGCCGGCTG GGTCCAGATC CGCGTGCACT GGTGCGGAAT CTGCGGGTCC
GACCTGCACG AATACGTCGC CGGGCCCGTA TTCATCCCGG TCGACGCGCC GCACCCGCTG
ACGGGCCTGA AGGGCCAGTG CATCCTCGGC CACGAGTTCA GCGGCGAAAT CGCGGCGCTC
GGCGCGGGCG TGACGGGCTT CGCCCTCGGC GACCGCGTGA CGGCCGACGC GTGCCAGCAC
TGCGGCACCT GCTGGTATTG CAAGCATGGG CTGTACAACA TCTGCGAGAA CCTGGCGTTC
ACCGGGCTGA TGAACAACGG CGCGTTCGCC GAATACGTGA ACGTGCCGGC CGAGCTGCTG
TACAAGCTGC CCGAGAACTT CCCGACCGAG GCCGGCGCGC TGATCGAACC GCTCGCGGTC
GGCCTGCACG CGGTGAAGAA GGCCGGCAAC ATCGTCGGCC AGACCGTCGT CGTGGTCGGC
GCCGGCACGA TCGGGCTGTG CACGATCATG TGCGCGAAGG CCGCGGGCGC CGGGCGCGTG
ATCGCGCTGG AAATGTCGGC CGCGCGCAAG CAGAAGGCGC TGGAGGTCGG CGCGACGGTC
GTGATCGATC CGAAGGCGTC GGACGCGATC GCGGAAATCA AGGCGCTGAC GGGCGGCTAC
GGCGCCGACG TGTCGTTCGA GTGCATCGGG CACACGGCCA CCGCGCAGCT CGCGATCGAC
GTGATCCGCA AGGCCGGCAA GTCGGTGATG GTCGGCATCT TCGAGGAGCC GACGTCGTTC
AACTTCTTCG ACATCGTGTC GACCGAGAAG GAAGTGATCG GCTCGCTCGC GTACAACGGC
GAATTCGCGG ACGTGATCCG CTTCATCGCG GACGGCCGCA TCGACGTGCA GCCGCTGATC
ACCGGGCGAA TCACGCTCGG CGACATCGTC ACGCACGGCT TCCAGGAGCT GGTCAACCAC
AAGGACCGGA ACGTGAAGAT CATCGTCCAG CCCGCGACGG CCTGA
 
Protein sequence
MKAAVWHGRN DIRVEEVPVP AHPPAGWVQI RVHWCGICGS DLHEYVAGPV FIPVDAPHPL 
TGLKGQCILG HEFSGEIAAL GAGVTGFALG DRVTADACQH CGTCWYCKHG LYNICENLAF
TGLMNNGAFA EYVNVPAELL YKLPENFPTE AGALIEPLAV GLHAVKKAGN IVGQTVVVVG
AGTIGLCTIM CAKAAGAGRV IALEMSAARK QKALEVGATV VIDPKASDAI AEIKALTGGY
GADVSFECIG HTATAQLAID VIRKAGKSVM VGIFEEPTSF NFFDIVSTEK EVIGSLAYNG
EFADVIRFIA DGRIDVQPLI TGRITLGDIV THGFQELVNH KDRNVKIIVQ PATA