| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_3950 |
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| Symbol | |
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| ID | 4312846 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008391 |
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| Strand | - |
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| Start bp | 846367 |
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| End bp | 847914 |
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| Gene Length | 1548 bp |
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| Protein Length | 515 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 638151792 |
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| Product | GntR family transcriptional regulator |
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| Protein accession | YP_775838 |
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| Protein GI | 115358700 |
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| COG category | [E] Amino acid transport and metabolism
[K] Transcription |
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| COG ID | [COG1167] Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.115894 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCGCGA CGGCGCCGGG ATTGCGCCAC CGATCGCCGC GCCATGCACC GAAACCTCCA
CGCCGCCATA CGCTGATGAC GACAACCCTT CCTTCCGGCA CCGCGCCGGT AATGCCGCTC
GACGCGCCGC TCGCGCGCAC GGCCGGTGCG CCTTCGTTGC AGCGGCAATT GCTGCGACGC
GTGCGCGACG CGATTCTCGG CGGCGCGATG CCGGCCGGCA CGCGGCTGCC CGGCACGCGC
GCGCTGGCCG AGACGCTCGG CGTGTCGCGC AATACGACGG CGGCCGTCTA CGAGCAGCTC
GTCGCCGAAG GCTTCCTGCA ATCCGATCGT CGCGGCACGC GCGTGGTGGG CCTGTCGCGG
CCGGCGCCGC CGCGTCGGCG GGCCGCTCCG CCGGTCGTCG CGCAACGGCT CGGCCGGATG
CGTCCGAGCC TGATCGGCAC CGGCGAGTCG GACGCTTTTC GGCCGGGCGT GCCCGCGCTG
TCGCATTTTC CGATCGATGC GTGGCGGCAC GCGATCGACC GCGCGCTGCG CCGCGCCGGC
CGCGACCTGC TCGCGTACGG CGACCCGCTC GGCGAGCGCG CGCTGCGCGA GTCGATCGCG
CGCCATCTGG CCGTGACGCG CGGCGTGCGC TGCGATCCCG AGCAGATCGT GATCACCGAA
GGCGCACAGG GCGCGATCGC GCTGTGCGCG CAGCTGCTGA CGAATCCCGG CGATACGGTC
TGGGTCGAGG AGCCCGGCTA TCGTGGCGCG CGCACTGCGA TGCAGGCGGC CGATCTCGAC
GTCGTGCCGA TGCCGGTCGA CGCGGAGGGG CTGCGCGCGG AAGACGCGGA CTGGCGCGAA
CGGACGCCGC GGCTCGTCTA TACGACGCCG TCGAACCAGT TTCCGACCGG CGCGGTGCTG
TCGATCTCGC GCCGGCTCGC GCTGATCGAC GCCGCGCGCG GGCATCGCGC GTGGATCATC
GAGGACGACT ACGACAGCGA GTTTCGTCAC ACCGGCGAGC CGATCGGCGC GTTGCAGGGG
CTCGCGGCCG ATTCGCCGGT CGTCTATCTC GGCTCGTTCA GCAAGACGAT GTTTCCGGCG
CTGCGGATCG GTTTTCTCGT GCTGCCCGAC GCGCTGCTGG CGGCGGTGCG GCCGGCGCTG
CCGGAGATGC TGCGCGGCGG GACGCGCCAC GTGCAGCTCG CGCTTGCCGA TTTCATCGAG
TCGGGGGAGT ACGGGCGGCA TCTGGGGCGG ATGCGCCGGC TGTATCGCGA CCGGCGGCGC
GCGCTGCTCG CCGCGCTGGA CGACGCGTTC ACCGCGCCGC ATCAGGTCGA AGGCGGGCCG
TGCGGGCTGC ATCTGGCGCT GCGGCTGCCG GCGCGCTATC GCGACCGCGC GATCGTCGAG
GCGGCGCGCG AGCATGGGAT CGGGCCGTTT CCGCTGTCGG GTTTTTCGCT CCACGCGACG
TCGGCGGCCA ACGGGCTCGT GCTCGGCTTC GGCAATACGT CGGCCGATGC GTTCGCGCCG
ATGCTGCGGA CGCTGTCGGC GATCGCGCAT CGGGTCGCGG GGGATTGA
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| Protein sequence | MPATAPGLRH RSPRHAPKPP RRHTLMTTTL PSGTAPVMPL DAPLARTAGA PSLQRQLLRR
VRDAILGGAM PAGTRLPGTR ALAETLGVSR NTTAAVYEQL VAEGFLQSDR RGTRVVGLSR
PAPPRRRAAP PVVAQRLGRM RPSLIGTGES DAFRPGVPAL SHFPIDAWRH AIDRALRRAG
RDLLAYGDPL GERALRESIA RHLAVTRGVR CDPEQIVITE GAQGAIALCA QLLTNPGDTV
WVEEPGYRGA RTAMQAADLD VVPMPVDAEG LRAEDADWRE RTPRLVYTTP SNQFPTGAVL
SISRRLALID AARGHRAWII EDDYDSEFRH TGEPIGALQG LAADSPVVYL GSFSKTMFPA
LRIGFLVLPD ALLAAVRPAL PEMLRGGTRH VQLALADFIE SGEYGRHLGR MRRLYRDRRR
ALLAALDDAF TAPHQVEGGP CGLHLALRLP ARYRDRAIVE AAREHGIGPF PLSGFSLHAT
SAANGLVLGF GNTSADAFAP MLRTLSAIAH RVAGD
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